Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02735 ATGTTTTTTCTTTTTTGCTCTTTCCTTAATTGTAAGCGAGAGAGCATGTTGCATGAGCAGAACCTTGGTATGAGGGAATTCCGACCAGGGAACTTCGTGTACGATGGTGAGGATATTCCATTTGGGACTCTGTGGTGGTTCGTTTATGCTGGAATTTCATGTTTGCTTGTTCTCTTCGCTGGGATTATGTCTGGTCTCACCCTTGGATTAATGTCTCTGGGTCTCGTTGACCTTGAGATTCTCCAGCGGAGTGGCTCCTCCACTGAGAAGAAACAAGCTGCTGCTATTTTGCCGGTTGTTCAGAAACAGCATCAGTTGCTTGTGACCTTGCTTCTTTGTAACGCCTGTGCCATGGAGGCACTTCCAATTTACCTTGACAAAATTTTCCATCCTTTTGTAGCAGTAGTGTTATCTGTGACTTTTGTTCTAGCTTTTGGAGAGGTTATCCCACAAGCTATATGCACAAGATATGGGCTCTATGTTGGTGCTAATTTTGTGGGGCTTGTACGTGTCCTGATGATCATTTGTTATCCAATTGCTTACCCTATTGGAAAGGTTCTGGATGTTTTACTTGGACACGATCATGCACTGTTTAGGCGAGCACAGCTGAAAGCCCTTGTTTCAATCCATAGCCAAGAGGCTGGTAAAGGAGGTGAACTCACTCATGATGAGGCAACAATTATCAGTGGAGCACTAGATCTCACAGAGAAGACTGCAGAGGAGGCTATGACACCAATTGAATCTACATTTTCCTTGGATGTTGCTTCCAAATTGGACTGGGAAGCAATTGGGAAAATTCTTGCACGAGGTCATAGTCGTGTTCCTGTATACAGTGGAAACCCCAAAAATATAATTGGCCTCTTACTAGTAAAAAACCTTCTTACTGTAAGAGCTGAAACAGAGACTCCAGTCAGTGCTGTTTCCATCCGGAGAATTCCTAGGGTTCCAGCAGATATGCCTCTATATGATATCCTCAATGAGTTTCAAAAAGGAAGCAGTCATATGGCAGCTGTAGTCAAGGTTATAAGAGAGAGAAACAACCCTCAGGCAGCTGGTGACATTGAGAAATCCAAGGATAAGGAAGTCATCAAACATAATTCTCAACTAACTATGCCGTTGCTAGCCAGGTTTTATGAGGAATCAGAAAATGTTGTCAATATTGACAAACCCTCTAAGCATGTTGCAGACCAACAATTTCAAAAGGATGGCACTGCAACAAATGCTGTCCACCAATCTCTTGACAATGTTGAAGATGGGGAGGAAGTTATTGGAATCATTACCCTGGAGGATGTGTTTGAAGAACTCCTGCAGGTAGCCTCCACTTGCACTAATCACATCTTGTATGTCTTTAGTTGCCAGACTGAGATAGAATGGATTATCTGCAACCAGCCTGGTTATCTACTTATATTTTTTTATCATCCCTTTAAGCTTATGTCAGTTAGATGGGATTGTTGGACGTTATTGGTGCATCAAAGAAAATACAATTGTTGTCCGTGGAATAAAGAAAATTTGCTAATAATTTTCATCCATGTAGGAAGAAATCGTGGACGAGACTGA 1557 0.4207 MFFLFCSFLNCKRESMLHEQNLGMREFRPGNFVYDGEDIPFGTLWWFVYAGISCLLVLFAGIMSGLTLGLMSLGLVDLEILQRSGSSTEKKQAAAILPVVQKQHQLLVTLLLCNACAMEALPIYLDKIFHPFVAVVLSVTFVLAFGEVIPQAICTRYGLYVGANFVGLVRVLMIICYPIAYPIGKVLDVLLGHDHALFRRAQLKALVSIHSQEAGKGGELTHDEATIISGALDLTEKTAEEAMTPIESTFSLDVASKLDWEAIGKILARGHSRVPVYSGNPKNIIGLLLVKNLLTVRAETETPVSAVSIRRIPRVPADMPLYDILNEFQKGSSHMAAVVKVIRERNNPQAAGDIEKSKDKEVIKHNSQLTMPLLARFYEESENVVNIDKPSKHVADQQFQKDGTATNAVHQSLDNVEDGEEVIGIITLEDVFEELLQVASTCTNHILYVFSCQTEIEWIICNQPGYLLIFFYHPFKLMSVRWDCWTLLVHQRKYNCCPWNKENLLIIFIHVGRNRGRD 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02735 518 Gene3D - 224 355 IPR046342 -
Pumo5g02735 518 CDD CBS_pair_CorC_HlyC_assoc 238 339 IPR044751 -
Pumo5g02735 518 Pfam Cyclin M transmembrane N-terminal domain 52 223 IPR002550 -
Pumo5g02735 518 PANTHER METAL TRANSPORTER CNNM 32 437 IPR045095 GO:0010960
Pumo5g02735 518 FunFam DUF21 domain-containing protein At4g14240-like 224 361 - -
Pumo5g02735 518 ProSiteProfiles CNNM transmembrane domain profile. 42 224 IPR002550 -
Pumo5g02735 518 SUPERFAMILY CBS-domain pair 229 436 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02735 Pumo-Chr5 74036358 74043154 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02735 K16302 - gmx:100777230 778.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02735 5 74036358 74043154 Pumo5g02735 5 74036358 74043154 ECH