Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02717 ATGAGAGAGATACAGTTACAGTTAAGCCAAACCCAGAAGGTTCGACTTCAGAAGGCTCTAGAACAGTTAGAGTCTCTGTCAACCAAGGTGAATTTCGATGCTTCGGTGATAATCGCCGATTCCATCCACGTCAACGAAGACGGCGTCCTCAAGGGTCACGGAACCGCCGAGCTCAACGGCGAACTCGTCGCCACCCTATGCGGCGTCGTTGAGCGCGTCAACAAACTTATCTACGTTCGCACGTTACGCGCCAGGTATAAACCTGAGGTTGGTGACATCGTTATAGGACGAGTTGTTGAGGTTGCTCAGAAGCGCTGGAGATTGGAGATAAATTACAATCAGGATGCAGTTTTGATGCTTTCTTCTATGAATATGCCTGATGGTGTCCAGAGGCGGAGGACATCTGTGGATGAGCTAAACATGCGCTGCATTTTCAAGGAGAAGGATGTTGTTTGTGCTGAAGTTCGTGGTTTCCAGCACGATGGCTTACACCTTCAAGCAAGGAGTCGGAAATACGGAAAGCTTAATAGAGGTCAACTGCTTACAGTCCCACCTTATTTAGTGAAGAGACAAAAACAACATTTCCATCATCTGGAGGAGTTTGGTATTGATTTGATACTTGGCTGTAATGGATTCATATGGGTCGGGGAACATATTGAAGCCAAAGATGACATGGTAGTTGAAGATCAAGTGAGCCAATCTGATCCCCAAGTTCTATTGCCTAATAAAAATTGTGTGAGTCTTGAAGAACAAGAGAAAAATTATACAATATTGGAGACAAGAAAATACATATGCAGAGCTGCTAATGCTGTTAGAGTACTATCAACCTTAGGCTTCAATATTACATTGGAAATCATCAAGGGAATTATTGATCTAAGCATATCTATGAATGTTGATATACACGAGATGCTTGGTTCTGAGTTTTGTGTTCTGGTTGCTGAAAAAGAGGCTGAAAGGAGAAGCTCAATGAAAAAAAAGCGGTAG 984 0.4329 MREIQLQLSQTQKVRLQKALEQLESLSTKVNFDASVIIADSIHVNEDGVLKGHGTAELNGELVATLCGVVERVNKLIYVRTLRARYKPEVGDIVIGRVVEVAQKRWRLEINYNQDAVLMLSSMNMPDGVQRRRTSVDELNMRCIFKEKDVVCAEVRGFQHDGLHLQARSRKYGKLNRGQLLTVPPYLVKRQKQHFHHLEEFGIDLILGCNGFIWVGEHIEAKDDMVVEDQVSQSDPQVLLPNKNCVSLEEQEKNYTILETRKYICRAANAVRVLSTLGFNITLEIIKGIIDLSISMNVDIHEMLGSEFCVLVAEKEAERRSSMKKKR 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02717 327 SUPERFAMILY Nucleic acid-binding proteins 84 175 IPR012340 -
Pumo5g02717 327 FunFam Exosome complex component RRP4 86 176 - -
Pumo5g02717 327 CDD KH-I_Rrp4_eukar 178 317 - -
Pumo5g02717 327 Gene3D - 87 176 IPR012340 -
Pumo5g02717 327 CDD S1_Rrp4 85 175 - -
Pumo5g02717 327 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 178 323 IPR036612 GO:0003723
Pumo5g02717 327 Gene3D - 36 86 - -
Pumo5g02717 327 SUPERFAMILY Ribosomal L27 protein-like 45 84 - -
Pumo5g02717 327 Coils Coil 6 26 - -
Pumo5g02717 327 PANTHER PNAS-3 RELATED 31 319 IPR026699 GO:0000178|GO:0003723
Pumo5g02717 327 Pfam KH domain 178 218 IPR004088 GO:0003723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02717 K03679 - gmx:100776358 603.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02717 5 73761991 73764080 Pumo5g02717 5 73761991 73764080 ECH