Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02714 ATGATGACAGACGAGGAACTGATGCAGAAACTTGAAGACTTGACCAAAAACGCCCAACATCACCAGTTGGAGACTCTCCGTTCGATCCTTCTTCACAATGGAACCGTGCACTATCTTCAATCCTTCAAGAAGGGCCCTCTTCATCATCTTGATCCCTCCACTTTCACACGTGTCGTGCCCCTGTCTTCCTATGAAGACTACGTTGACTACATTAACCAGATGGCAGAAGGGAAAGTTGACCCTTTTCTATCCGTCGATCCTCTCCGCTGTTTCTTCTACAGCTCGGGAACAAGTTCAAGCACCATGAAACCCAAATTGATCCCTTATTTTGATTCAAGCCTTTCCAAAGCTGCCTCCTTTATTGGTCACAGAGGCAGTGTTGCTGTTCGTCAAAGGCAATTTCCTCCAAGGCCAGAAGTGAACAAGATCCTATGGTTTCTCTATGCTGACAACATTACTACCACTAAATGCGGCTTGAAAGTCATGGCTGCTTCTACATACCCTTTGCAAAGTGGTAATGCTACCCCTCAACAACTTGCAACATTTTCCAGTCCCCTAGAAGTGATTCTTGGAACAAATGTTGAGCATCAAATGTACTGCCACCTTCTATGTGGCCTTAGGAATCTGGACCTCATAGATGGAATCACAACCCCTTATGCCATAGGCTTGATTAAAGCATTTGGTTATCTGGAATCCAAGTGGGAACAACTATGTGATGATCTTGACCATGGATTTCCATGTAATGAAATTTCTGAGGTGGCAATGAGGGAAGCTGTGACTAAGACACTTGGTGGACCTCAGCCAGAATTGGCCAACAGAATAAGGTTAATCTGTGAAGGTAACAACTGGGGTGGAATTGTGTGTAGATTGTGGCCAAACATTCGTTATATCAGGTGTGTTACCACTGGAAGCATGAAACAGTACTACCAAAAGCTCAAGTACTCTGCAGGAGAGGTACCTATTTTAGGAGGAGATTATTTTGCTTCAGAGTGCTGTGTTGGTATAAATTTAGACATAATGCAACCCCCTGAGACAACACGGTTTGTGATGCTTCCAACTTTTGCTTACTTTGAGTTTCTTCCATTTAACATGAATGAGGACAACGATGTTAGCAAGGAAACTGTGGACCTTAGCGGTGTAGAGGTTGGGAAGATGTATGAAGTGGTTGTTACTACTTACAGAGGATTTTACCGCTACCGTTTGGGGGATATAGTGAGAGTTGTTAGTTTCTATAACTCATCTCCACTGGTAGAGTATGTGATGAGAGCACCTAAAACTCCTGCTGAGATTGTGACTGAGAAGGACTTGATTTCAGCAGTTGAAAATTTTCAACTTGCACTTAGAGGTGTTATGAGAATTGAGATTGTTGAGTTTGCAAGTTTCTTGGACCAGGAGTCAATGCTGAAGCAGTTGAAGGTATTTGTGGAAGTCCAAGAGGAATCTGATTTTCTGGAGGATAAACTAGAGGAATCAGTTAAAGTTTTGAGAAGTTGTATCTCCTCTCTCGAGAGTGGCTTGGGAGCTATATACAAGGTGCAGAGGGACAAAGGTCAAGTTAGGAACTTACTTATATTCATCATAAGGCCTGGAGCTTTTGATCAGTTATCAGAATTAGCCATTAAGAATGGAACATCAGCTAGTCAATATAAACCACCCAAGATCATAAGGAATCATGAAGTTGTCAAACTCTTGGAAAAATTAGCCTTTGTGACAGTATCATTCGATGGCTAA 1731 0.424 MMTDEELMQKLEDLTKNAQHHQLETLRSILLHNGTVHYLQSFKKGPLHHLDPSTFTRVVPLSSYEDYVDYINQMAEGKVDPFLSVDPLRCFFYSSGTSSSTMKPKLIPYFDSSLSKAASFIGHRGSVAVRQRQFPPRPEVNKILWFLYADNITTTKCGLKVMAASTYPLQSGNATPQQLATFSSPLEVILGTNVEHQMYCHLLCGLRNLDLIDGITTPYAIGLIKAFGYLESKWEQLCDDLDHGFPCNEISEVAMREAVTKTLGGPQPELANRIRLICEGNNWGGIVCRLWPNIRYIRCVTTGSMKQYYQKLKYSAGEVPILGGDYFASECCVGINLDIMQPPETTRFVMLPTFAYFEFLPFNMNEDNDVSKETVDLSGVEVGKMYEVVVTTYRGFYRYRLGDIVRVVSFYNSSPLVEYVMRAPKTPAEIVTEKDLISAVENFQLALRGVMRIEIVEFASFLDQESMLKQLKVFVEVQEESDFLEDKLEESVKVLRSCISSLESGLGAIYKVQRDKGQVRNLLIFIIRPGAFDQLSELAIKNGTSASQYKPPKIIRNHEVVKLLEKLAFVTVSFDG 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02714 576 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 3 567 IPR004993 -
Pumo5g02714 576 Coils Coil 4 24 - -
Pumo5g02714 576 Pfam GH3 auxin-responsive promoter 10 558 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02714 Pumo-Chr5 73744941 73748714 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02714 8 571 EF-hand Containing Proteins AT1G23160 32.230 2.26e-92 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02714 K14487 - gmx:100786829 1088.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02714 5 73744941 73748714 Pumo5g02714 5 73744941 73748714 ECH