LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo5g02688	ATGTCTGGAAATGCATCAACTTCAAAGCCTAATATAGGTCTGAGTGGATCTGATGGCCTTTCACATGCTTACATTCAGTATCCACCACTTCGGTGCAGTGTTCCTGGATCAAGTGGATTATTTTATGATGATGGAAATAAGTTGCTACTCTCTCCAACAGCTGACCAGGTTTTTTCATGGAAAGTTGGTCCCTTTGATCCTCTCATTGATCCAACCACTGATTCAATAAGTGAAGGCCCTATTATAGCTATTCGGTATTCTTTAGACACAAAGGTAATAGCAATCCAACGATCAAACCATGAGATACAGTTTTGGGATAGAGAAACTGGGGGGACTTTTAGCCATAAGTGCAGGCCAGAATCAGAAAGTATACTTGGATTTTTTTGGACAGATAGTCTACAGTGTGATATTGTTCTTGTTAAGACCAGTGGTCTAGACTTGTACGCATATAATTCAGAGTCAAAATCACTGCAACTGGTGCAAACAAAGAAACTGAATGTGAGTTGGTATGTTTACACCCATGAAAGTCGCCTGGTTCTTCTTGCTTCTGGCATGCAGTGTAAGACATTCCATGGATTTCAGATTTCATCTGCAGATATTGTTCGCTTGCCAAGATTTGAGATGGTTATGGCCAAATCTGAGGCAAATAGTAAGCCTGTTTTAGCAGCTGAAGACGTCTTTATTGTCACTGTTTATGGTAGGATATACTGCTTGCAAGTTGATAGAGTTGCTATGCTGCTCCATTCTTATAGGCTATATCGTGATGCAGTGATACAGCAGGGTTCTTTACCAATTTATTCCAACAGGATTGCCGTGAGTGTGGTCGACAATGTACTTCTTATTCATCAAGTTGAGGCAAAGGTTGTTATACTTTATGATCTGTTTGCAGATTCTCGAGCACCGATATCTGCACCACTTCCTTTATTATTAAGGGGTTTCCCCAGATCCAGCACTTTATCTCAATCTAGTGGTAGAGAAAGTGAGAGTTCAGACAGTAATGTTTTGAGTAATCATGAAGCAGTTACATACGCCAATACATGGACTTTCCTAGTGCCTGACCTCGTATGTGACGTGGCCAATAAGTTAATGTGGAAATTCAATTTAGACTTAGAGGCAATTTCTGCTAGTAGCTCAGAGGTCCCATCAGTATTAGAGTTCCTGCAGCGGCGGAAGTTGGAAGCTAACAAGGCTAAACAATTGTGCTTGGGTATAACACGTACACTTATTCTAGAGCATAGGCCTGTGCCTGTGGTTGCCAAGGCTGTAAATGTACTAGTCACCTCATACTCCCATTCAATTAAAACTGGTAGCTATCTTAAGGGACTGAAACCAGAGAAGACATCAACTTCTGTTGTACAAAATACTGGTGCTGAGGTATCTGCTATTGATACAGATGTAATTGGAAAATCGATCATCCATGAATCTACAAGAAGATTAGACAGTGGATCTCTTAATAAAGCTTCAACTGTTTTAAGTTTGGATTCTGAGGATGAGTCCCAGTCTGCAAATCCAAAACACAGTTCAAAGGAAGCCCAAGTGGAGGGTGAAGTGAATAATGAGATCTCTCCGAGCACTGGAGCTCATGGTGCTTATGTTATGCAATCATCTCTTCAGTCTGGGCAAGAGGAATCCCAACTAACTTCTGCAGCAATTTCGCCAGACGAGATGTACAGCTTTGTCTTTTCTCCTGTTGATGAAGAGATGGTCGGAGACCCTTCTTACTTGGTTGCTATCATTATTGAGTTCCTTCACAGTGCAAATTCAGAAAAGATTCGTGTACTCCCAAATGTTTATGTATTAATAATTCAACTTCTGGCCCGCAATGAGCATTATGCAGAGCTCGGGTTGTTTGTCTTAAACAAGATTCTGGAGCCCTCTAAAGAAGTTGCACTACAACTCCTAGAGTCTGGTCGTCAGAATGCCCAAACTAGGAAGCTTGGTCTGGATATGCTGAGACAACTGGGTTTACATCACGATTATGTTTTACTGCTCGTGCAGGATGGATACTACCTTGAAGCCTTACGATATGCACGGAAATACAGGGTGGATACCATCCGGCCATCATTGTTCTTAGAAGCAGCATTTGTTTCCAATGACTCCCAACATCTTGCTGCGGTTCTAAGATTCTTTACAGATTTCCTTCCTGGCTTCAAAAACACTTCAGACCATAATAGATACTGCCGCATACTGAATGAAATGAACTCATCCATGACTGTTTGA	2220	0.414	MSGNASTSKPNIGLSGSDGLSHAYIQYPPLRCSVPGSSGLFYDDGNKLLLSPTADQVFSWKVGPFDPLIDPTTDSISEGPIIAIRYSLDTKVIAIQRSNHEIQFWDRETGGTFSHKCRPESESILGFFWTDSLQCDIVLVKTSGLDLYAYNSESKSLQLVQTKKLNVSWYVYTHESRLVLLASGMQCKTFHGFQISSADIVRLPRFEMVMAKSEANSKPVLAAEDVFIVTVYGRIYCLQVDRVAMLLHSYRLYRDAVIQQGSLPIYSNRIAVSVVDNVLLIHQVEAKVVILYDLFADSRAPISAPLPLLLRGFPRSSTLSQSSGRESESSDSNVLSNHEAVTYANTWTFLVPDLVCDVANKLMWKFNLDLEAISASSSEVPSVLEFLQRRKLEANKAKQLCLGITRTLILEHRPVPVVAKAVNVLVTSYSHSIKTGSYLKGLKPEKTSTSVVQNTGAEVSAIDTDVIGKSIIHESTRRLDSGSLNKASTVLSLDSEDESQSANPKHSSKEAQVEGEVNNEISPSTGAHGAYVMQSSLQSGQEESQLTSAAISPDEMYSFVFSPVDEEMVGDPSYLVAIIIEFLHSANSEKIRVLPNVYVLIIQLLARNEHYAELGLFVLNKILEPSKEVALQLLESGRQNAQTRKLGLDMLRQLGLHHDYVLLLVQDGYYLEALRYARKYRVDTIRPSLFLEAAFVSNDSQHLAAVLRFFTDFLPGFKNTSDHNRYCRILNEMNSSMTV	739

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo5g02688	739	MobiDBLite	consensus disorder prediction	499	513	-	-
	Pumo5g02688	739	SUPERFAMILY	WD40 repeat-like	43	196	IPR036322	GO:0005515
	Pumo5g02688	739	MobiDBLite	consensus disorder prediction	491	520	-	-
	Pumo5g02688	739	PANTHER	COLON CANCER-ASSOCIATED PROTEIN MIC1	19	734	IPR040371	GO:0010506\|GO:0035658
	Pumo5g02688	739	Pfam	Colon cancer-associated protein Mic1-like	572	712	IPR009755	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo5g02688	K24763		-	gmx:100500389	1364.75

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pumo5g02688	5	73241411	73249076	Pumo5g02688	5	73241411	73249076	ECH