Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02681 ATGATGGAGGAAGAAGAAGACCAGCAGAAGCTTCCAGATCTGGTGAAGGAACTGGTACACCGCTTACTCTCCCAAAACCTTCCCCCAAATTCCCCTCCCCTAAACCCTGACTCCCCGGAATTCCGCAACTCCCTCCGCTACGCCCTCCGCATCCTCTCCAGCCGCCTCACCCCCTCCGTCGCCCCCGACGCCGCCGCCATCGCCGACTCAATTAAGCGCCGCCTCGCCACCCACGGCCACTCCTCCGAGGCCCTCTCCTTCGCCGACCTCTTCTCCAAATTCGCCTCCAAGGCCCAAAGCGTCAACAACAAATGGGCCGTCATCTACCTCCTCAAAATCATCTCCGAAGATCGCCACGTCACCACCACCACAGCAGCCCCTCTCCTCCCCAACCTCAATTTCTCCGAACCCGCCTCCAACAAACCCTGGAACAACAACGGCGTCCTCTTGGTCTCCAAGGATCCCGAGAACCGCCGCGACGCCGCGTTTCGCGAATTCACCAATTTGGTCAAGGAGGAAAACGACGTGTCGGAAGAGGTTCTGGTCCGGGACGTGCTCTATGCTTGCCAAGGAGTTGATGGTAATTTTGTGAGATTCGAGAGCGAGAGTAAGCGTTATTTGATACCTGACTCCACTAGGGTTCCCAGAGCCACTAGGAGTATGGTTTACAACCTCTGTGAATTGGGGGTTTTGTTTAGGAAGGTTAGTGGTTACATTACGCAGTGTATGGATCGGTTTCCCAATGAGGATGTGGGAACTGTGGGCCAGGCTTTTTGTTCCGCTTTGCAGGATGAGCTTAGTGAGTATTATAAGTTGCTGGCGGTTCTTGAGGCCCAGGCTTCCAACCCCATTCCTTTGGTGTCGGAATCCGCGAGCTCTGGGAACTATCTTTCACTGAGGAGGCTGGCGGTTTGGCTGGCTGAGCCCATGGTGAAGATGAGGCTGATGGCTGATTTGGTTGACAAGTGTAGGGTTTTGCGTGGCGGGGCGATGGCCGGTGCGATTCATTTGCACGCGCAGCATGGTGATCCGTTGGTTCATGAGTTCATGAGGAGGTTGCTGCAGAGAGTGTGTTCTTCACTGTTTGAGATGGTGAGGAGGTGGGTTTTGGAAGGGGAGTTGGAGGATATCTTTGCTGAGTTTTTCATTGTTGAGCAGCCTGTGAAGGCTGAGTCCCTTTGGAGAGAAGGGTATAGGCTCCATGATGCCATGCTTCCTTCATTCATTTCGCCTTCGCTTGCACAGAGGATCTTGAGGACTGGCAAGTCGATTAATTTTCTTCGCGTTTGTTGCGAGGATCGCGGTTGGGCTGAGGCTGCGACCGAGGTTGTCACTGATAATGGAGCAACGGCGAGAAGAGGTGGTTTTAGATATGGGGAAACGGATACCCTTGAGTTTTTGGTGGATGAAGCTTCGAAGAGGATTGATAAGCATTTGTTGGATGTGATTTTCAACAGGTACAAGTTCAAAGATCACTGTCTTGCAATTAAGCAGTATTTGTTGCTTGGGCAAGGTGATTTTGTGCAGTATCTGATGGATATTGTTGGGCCTGAGCTTTCTGAGCCGGCTAACACTATAAGCTCTTTCAAACTTTCGGGATTGCTGGAAACTGCAATTCGGGCATCTAATGCTCAGTATGATGATCCTGACATTTTGGATAGGCTCAGGGTTAAAATGATGCCACATGAGAGTGGCGATAGGGGCTGGGATGTATTTTCACTAGAATATGATGCGAGAGTTCCACTGGATACAGTGTTCACGGAGTCTGTGATGGCAAGGTATTTAAGAATTTTTAATTTTCTGTGGAAGCTTAGAAGAGTGGAGCATGCGCTTACTGGCGCCTGGAAGACCATGAAACCAAACTGCATTACCTCTAATTCCTTCACCAGATTACAACATGCAGTAAAGATGCAGCTAGTTTCGACATTGAGGCGCTGTCAGGTTCTTTGGGTTGAAATCAATCACTTCATTTCAAACTTGCAATATTATATAATGTTTGAAGTGTTGGAGGTATCATGGTCAAATTTTTTGGCTGAGATGGAAGTAGCCAAGGATCTTGATGATCTACTTGCTGCTCATGAGAAATATCTGCATTCAATTGTAGAGAAATCTCTCCTTGGAGAGCTTTCTCAGTCTCTTTACAAGTCACTATTTGTAATTTTTGATCTTATATTACGTTTTCGGAGCCGTGCAGATCGGTTGTATGAAGGTATTCATGAGTTGCAAGCAAGATTCACAGAATCCTCCCAATCCTCTCGAGACCAGAATAAATCACGATCACGAAAGCAACTGAATGATAAATCTGCAGAACAAGGATCATGGATTGCTGATGGGAGGAAAGCCCTAACACAACGAGCTGGTGAATTTCTACGAAATATGGGACAAGATCTGGATGCAATTGCTAAGGAGTATTCATCATTGCAAGAGGGATTCATTTCTCAGTTGCCTGTACAGCAGCATGTTGATCTAAAATTTCTCTTTTTCCGTCTTGACTTCAACGAATTTTATAGGCGGTTGTGTCCTAGCATGTAG 2532 0.4822 MMEEEEDQQKLPDLVKELVHRLLSQNLPPNSPPLNPDSPEFRNSLRYALRILSSRLTPSVAPDAAAIADSIKRRLATHGHSSEALSFADLFSKFASKAQSVNNKWAVIYLLKIISEDRHVTTTTAAPLLPNLNFSEPASNKPWNNNGVLLVSKDPENRRDAAFREFTNLVKEENDVSEEVLVRDVLYACQGVDGNFVRFESESKRYLIPDSTRVPRATRSMVYNLCELGVLFRKVSGYITQCMDRFPNEDVGTVGQAFCSALQDELSEYYKLLAVLEAQASNPIPLVSESASSGNYLSLRRLAVWLAEPMVKMRLMADLVDKCRVLRGGAMAGAIHLHAQHGDPLVHEFMRRLLQRVCSSLFEMVRRWVLEGELEDIFAEFFIVEQPVKAESLWREGYRLHDAMLPSFISPSLAQRILRTGKSINFLRVCCEDRGWAEAATEVVTDNGATARRGGFRYGETDTLEFLVDEASKRIDKHLLDVIFNRYKFKDHCLAIKQYLLLGQGDFVQYLMDIVGPELSEPANTISSFKLSGLLETAIRASNAQYDDPDILDRLRVKMMPHESGDRGWDVFSLEYDARVPLDTVFTESVMARYLRIFNFLWKLRRVEHALTGAWKTMKPNCITSNSFTRLQHAVKMQLVSTLRRCQVLWVEINHFISNLQYYIMFEVLEVSWSNFLAEMEVAKDLDDLLAAHEKYLHSIVEKSLLGELSQSLYKSLFVIFDLILRFRSRADRLYEGIHELQARFTESSQSSRDQNKSRSRKQLNDKSAEQGSWIADGRKALTQRAGEFLRNMGQDLDAIAKEYSSLQEGFISQLPVQQHVDLKFLFFRLDFNEFYRRLCPSM 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02681 843 Coils Coil 259 279 - -
Pumo5g02681 843 Pfam Gamma tubulin complex component C-terminal 491 836 IPR040457 GO:0043015
Pumo5g02681 843 Gene3D - 490 835 IPR042241 -
Pumo5g02681 843 Pfam Gamma tubulin complex component N-terminal 182 485 IPR041470 -
Pumo5g02681 843 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 12 836 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
Pumo5g02681 843 MobiDBLite consensus disorder prediction 747 770 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02681 Pumo-Chr5 73016340 73020248 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02681 K16570 - gmx:100784710 1561.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02681 5 73016340 73020248 Pumo5g02681 5 73016340 73020248 ECH