Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02679 ATGTCTGTTATAGGGGCATATTCACATTTTCTCTACGGAGAGGTTTACCCGAGAGATCAACAGTGCCCACAGTACTTGGTGAGTGGGAGGGGCTATTTGTTGTCTCACAAGAGTGGTTGTGGGAACATATGGGTTGGAAGCAGAAAGAGACAAGGGAAGATTAAACGGAGGAATCTGCGTGTGGAAGCTATGTGGCCAGATTTGTCAAGACCCAGTGAGTTGGAGATGGAAGAAATTAATGACTCTGAGCATCTTGATCAAATTCTACTTCATGCCCACCAGAACTCACAGCCTATCCTCATTGATTGGATGGCTACTTGGTGCCGGAAATGCATCTATTTGAAGCCCAAGTTGGAAAAATTAGCCCCTGAATATCACAACAAAATCAAATTTTATTACGTGGATGTGAATAAAGTACCTCAGACTCTAGTCAAGCGAGGCAACATATCTAAAATGCCAACAATTCAGCTGTGGAAAGATGGAGAGATGAAAGCAGAAGTCATTGGAGGCCATAAGGCCTGGCTAGTTATTGAAGAAGTCAGAGAAATGATCCAAAAGTATTTATGA 567 0.4268 MSVIGAYSHFLYGEVYPRDQQCPQYLVSGRGYLLSHKSGCGNIWVGSRKRQGKIKRRNLRVEAMWPDLSRPSELEMEEINDSEHLDQILLHAHQNSQPILIDWMATWCRKCIYLKPKLEKLAPEYHNKIKFYYVDVNKVPQTLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKYL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02679 188 FunFam Thioredoxin 72 188 - -
Pumo5g02679 188 Pfam Thioredoxin 94 173 IPR013766 -
Pumo5g02679 188 SUPERFAMILY Thioredoxin-like 75 186 IPR036249 -
Pumo5g02679 188 Gene3D Glutaredoxin 72 187 - -
Pumo5g02679 188 ProSiteProfiles Thioredoxin domain profile. 59 188 IPR013766 -
Pumo5g02679 188 CDD TRX_family 83 185 - -
Pumo5g02679 188 PANTHER THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC 47 187 IPR044253 GO:0009570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02679 Pumo-Chr5 72981329 72984784 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02679 - - gmx:100811965 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02679 5 72981329 72984784 Pumo5g02679 5 72981329 72984784 ECH