Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02670 ATGGAGAAGATGGATCATTTCAGCCATATCCACCCTCTACTGTTAAAGCCGCAGGAATATAGAAATTACCACAACCAAGTCCCTTGCTCAGGTTGTGACAAACTACTTTCAGGTCCCGTCTTCTGCTGCGTCCAATGCAACTATGTCCTTCACAAAACATGCGCAGAAATTCCACGCCATGTGAAACACCCTTCTCACCCTCAACACCCCCTTATTCTCCTTTCCACCTCCCCTTATAAGGGAGCATACATATGTAATTCCTGTAGAGGCATCTTCAGAAACTTCGTATACCATTGTTTTCTTTGCGACTATGACCTTGATGTCTCATGTGCTTCTCAGTGCAACCCAGATGATGGCCACAAGCATGAGTTCATGTCTACCACAAATCCACAATCCTTTGTTTGTTATGCTTGTGGCATGCATGCAAATCAAGGTCTTGCTTGCTTATGCTCCATTTGTCAGATTTGGGTTCATTCTAGCTGTGCTGAATTGCCTCTTGCTATTAGAATAAAAGGCCATGACCACCCTTTGAAGCTCACTTATACCCTTCATCGTGTTTATGGTTTCTGGGGTAACTTAACTTGTGGTGTTTGTAATGGAGCAATGAGTCCAGCTTTTGCAGGTTACTTTTGTGAAACATGCCAATTCCCCGTGCATTTGAAGTGTCCGCAACAATATTTAGGAGAAGATTGGGAGACTGTAAAAGATGGTGAGGAATCACTCTCAGATGAAACTGAGCAATCCCAGGATATTGATTTTGCTTTTAGTTTCTTTGGTGATGAACATTTGTTGAAGTTCACGGAGGAATCAGAGAGTAATGATCTGCAATGTTCTGATAAACTCTGTGATGCGTGTATCCAACCCATCATGCCACCTTTCTTTTCTTGTAAAGAAGAAAATTGTGGCTTCTTTTTGCACCAAAGTTGTGCCGAATTACCAAGAATATTGAAGCAACACCCGTTTCATACGCACCCTCTAACTCTTCAATCCAAGGCTCCTTATGATGGCATTTATAGGTGTGACGGATGCAGAAGATTGAGCAATGGCTTTGTGTATCGTTGCGATGCGTGTCAATTCGACCTTGATGTTTGTTGTGGCTCCCTTGAGGAGAGAATTGAACATGAAAGTCACATGCATCCCTTGCTCCTCAAGAAGACAAGCGTTGCGAGGCAATGCAAAGGTTGTGATCTTTGGTCGAAGCATGTATTTGTGTGTGAAGTTTGTGAGGATTTTGCTATTGATTGTGGATGTGCTACTCTACCGAGTAAGGCGTGGCACGTGTATGACAAGCATCCTCTAAGTCTGAACTATTTTGTTGGAGGGGGTTTGAGGGAACATGAATGTGGCATTTGCAATGAGAAAATGTCTCCTAAGCAATGGTTTTATTACTGTGATGACTGTGACTCTGGTGCTCATCCTAACTGTGTTGTTGGCAAGTCTAGGCGTGTCAAGTTTGGAGGCAGTTTCCAATATGATGTTCATTCACACCCTCTTGCTTTGGTTGAAGAAGCTGCTGAGGAGAACACTGAATGTAAAGCCTGTGGTGAACGCTGCAATGGGTGGACACTTGAATGTGGCCAATGCAAACGCTACTTTCACCGCGAAGGACAGTGTTTCTGGAAAGAGTTTAAAAAGAGTGCAAAGTATTTGGAGTTATCTGGAATGATGAGGCACAGGTATGCAGCAAACGTGTTGGCCTCCACGCCCAATGTAACCACAAAGTGA 1725 0.4354 MEKMDHFSHIHPLLLKPQEYRNYHNQVPCSGCDKLLSGPVFCCVQCNYVLHKTCAEIPRHVKHPSHPQHPLILLSTSPYKGAYICNSCRGIFRNFVYHCFLCDYDLDVSCASQCNPDDGHKHEFMSTTNPQSFVCYACGMHANQGLACLCSICQIWVHSSCAELPLAIRIKGHDHPLKLTYTLHRVYGFWGNLTCGVCNGAMSPAFAGYFCETCQFPVHLKCPQQYLGEDWETVKDGEESLSDETEQSQDIDFAFSFFGDEHLLKFTEESESNDLQCSDKLCDACIQPIMPPFFSCKEENCGFFLHQSCAELPRILKQHPFHTHPLTLQSKAPYDGIYRCDGCRRLSNGFVYRCDACQFDLDVCCGSLEERIEHESHMHPLLLKKTSVARQCKGCDLWSKHVFVCEVCEDFAIDCGCATLPSKAWHVYDKHPLSLNYFVGGGLREHECGICNEKMSPKQWFYYCDDCDSGAHPNCVVGKSRRVKFGGSFQYDVHSHPLALVEEAAEENTECKACGERCNGWTLECGQCKRYFHREGQCFWKEFKKSAKYLELSGMMRHRYAANVLASTPNVTTK 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02670 574 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 3 73 - -
Pumo5g02670 574 SUPERFAMILY Cysteine-rich domain 146 223 IPR046349 -
Pumo5g02670 574 ProSitePatterns Zinc finger PHD-type signature. 99 198 IPR019786 -
Pumo5g02670 574 ProSitePatterns Zinc finger PHD-type signature. 29 102 IPR019786 -
Pumo5g02670 574 SUPERFAMILY Cysteine-rich domain 301 379 IPR046349 -
Pumo5g02670 574 SMART PHD_3 447 515 IPR001965 -
Pumo5g02670 574 SMART PHD_3 281 344 IPR001965 -
Pumo5g02670 574 SMART PHD_3 134 215 IPR001965 -
Pumo5g02670 574 SMART PHD_3 28 89 IPR001965 -
Pumo5g02670 574 Pfam C1 domain 172 222 IPR004146 -
Pumo5g02670 574 Pfam C1 domain 320 365 IPR004146 -
Pumo5g02670 574 Pfam C1 domain 261 310 IPR004146 -
Pumo5g02670 574 Pfam C1 domain 7 55 IPR004146 -
Pumo5g02670 574 Pfam C1 domain 64 111 IPR004146 -
Pumo5g02670 574 SUPERFAMILY Cysteine-rich domain 398 480 IPR046349 -
Pumo5g02670 574 SUPERFAMILY Cysteine-rich domain 493 534 IPR046349 -
Pumo5g02670 574 SUPERFAMILY Cysteine-rich domain 257 316 IPR046349 -
Pumo5g02670 574 SUPERFAMILY Cysteine-rich domain 32 112 IPR046349 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02670 - - gmx:121174110 1077.39