Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02621 ATGGGTTTGGATTTGTTCTTTTGGCTTGTGATTTGTCTCCCTCTCAATTTTGCTTTTTTAGCCTCAACGTTCTACCAGGTTTTGATGTTGTCTGACTTGGAAGCTGACTTTATCAACCCATATGATGCTTCATCTCGGATTAATTACTTCATCGTTCCTGAGATTATTGGTCAGGGGTTATTGTGCGCTTTCTGCCTTTTAACAGGTCATTGGATCATGTTTTTGATGACGGTTCCTGTTACATGCTATCATGTGATGCTGTACATGAAACGGCAGCATCTCATTGATGTTACTGAAGTGTTTAGGGTACTTAATGCAGAGAAGAAATTTCGGATAGCCAAACTTGCTTTTTACTTAACAATGATCTTTATAACTATCTTCAGGCTTGTATTGATGCTTGTTTACTACTTAGATTCTGAAGATGAATGA 429 0.3776 MGLDLFFWLVICLPLNFAFLASTFYQVLMLSDLEADFINPYDASSRINYFIVPEIIGQGLLCAFCLLTGHWIMFLMTVPVTCYHVMLYMKRQHLIDVTEVFRVLNAEKKFRIAKLAFYLTMIFITIFRLVLMLVYYLDSEDE 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02621 142 SMART Cornichon_2 6 127 IPR003377 GO:0016192
Pumo5g02621 142 Pfam Cornichon protein 7 127 IPR003377 GO:0016192
Pumo5g02621 142 PANTHER CORNICHON-RELATED 4 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02621 Pumo-Chr5 72209545 72212721 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02621 K20368 - gmx:100527262 275.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02621 5 72209545 72212721 Pumo5g02621 5 72209545 72212721 ECH
Pumo5g02621 5 72209545 72212721 Pumo3g02858 3 49695629 49704698 PCT