Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02619 ATGGCACCAAGATGGAAAGGAAAAGATGCAAAAGCTAAAAAGGATGCAGAAGCTGAAGCGCTCAAGGAACCCATGTCAAAGATAGTATCTCAACTTCAGTCCTCTCTAGTTCAATCAGATACTTGTGGATTTCTCTCTGATAACAGTGTGCACTTAGCAGTGGGAGCAGAACAACTTGATCTGCTTGATAAAGCATGCTTTGGCCGACCTGTGAGAACAGTTGAAAAGGACAAACACTGGTTTCAATTAAGCTTCGAGGAGGCATTCTACCTATGCTATTCCTTGAAATGCCTTAAGATTAATGGCAGTGATACCGGTCCCCAAAACGATGAAGAGCTATGGCATTACATGAGGTCCCAGAAAGAAACATTCCCTTGTTTCTTCAAGGCTTATTCCCACCTTCGAATGAAAAACTGGGTAGTGAGGTCAGGAGCTCAGTATGGTGTAGACTTCATTGTTTATCGTCATCATCCAGCTCGTGTCCATTCTGAGTATGGTGTGCTTGTTTTATCAGATGGAGATGATAAAGATCTAAATGGAAGACTAAGAGTATGGTCTGATATTCATTGCACAACTCGACTTCTTGGAAGCGTTGCAAAAATCTTATTGGTTTTGAATGTCAATAAAAATGGTAACAGCAATGAGTCTCCATTATGTCTGGCAAACTATACCGTTGAAGAGAGCACAATCACCAGATGGAGTCCAGAACAGTGTAGGGAAAAAGATGCAGTTCATGCTAAACACTGA 747 0.415 MAPRWKGKDAKAKKDAEAEALKEPMSKIVSQLQSSLVQSDTCGFLSDNSVHLAVGAEQLDLLDKACFGRPVRTVEKDKHWFQLSFEEAFYLCYSLKCLKINGSDTGPQNDEELWHYMRSQKETFPCFFKAYSHLRMKNWVVRSGAQYGVDFIVYRHHPARVHSEYGVLVLSDGDDKDLNGRLRVWSDIHCTTRLLGSVAKILLVLNVNKNGNSNESPLCLANYTVEESTITRWSPEQCREKDAVHAKH 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02619 248 Pfam tRNA intron endonuclease, catalytic C-terminal domain 128 213 IPR006677 GO:0000213|GO:0006388
Pumo5g02619 248 SUPERFAMILY tRNA-intron endonuclease catalytic domain-like 123 212 IPR036167 GO:0006388
Pumo5g02619 248 CDD tRNA-intron_lyase_C 128 212 IPR006677 GO:0000213|GO:0006388
Pumo5g02619 248 Pfam tRNA intron endonuclease, N-terminal domain 43 114 IPR006678 GO:0000213|GO:0006388
Pumo5g02619 248 FunFam tRNA-splicing endonuclease subunit Sen2-1 123 219 - -
Pumo5g02619 248 Gene3D - 123 217 IPR011856 GO:0003676
Pumo5g02619 248 PANTHER TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2 3 73 IPR006676 GO:0000213|GO:0006388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02619 K15322 - gmx:100810335 422.55