Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02618 ATGGACAAGCCACTACACTTCTTCCTATTATTTTTCCTTCTCACCCCATCCCTTCTCGCCACGTCACACTTTCCAAACCCAATCCCAATCACGCTCTCCGTCGCCGACTTCGGCGCCGCCGCCGACGGCCTCCGCTATGACACCGCGGCAATCCAGTCGGCCATCAACTCCTGCCCGGAAGGCGGTCCCTGCCACGTCACCTTCCCGGCGCCGGGAAAATACCTGACGGCCACCGTGTTCCTGAAATCCGGCGTGGTCCTGAACGTGGAGCCCGGGGCCACCATCCTGGGCGGCACCAGGCTGGAGGACTACCCGAAGGAGTCGTCGCGGTGGTACGTGGTCGTGGCGGAGAACGCGACGGACGTCGGAATCCGCGGCGGCGGAGTGGTGGACGGACAGGCTGCGAAGTTCGTGGTGAGGGAAGATCCGAGGAAGAACGTTATGGTTAGTTGGAACCAAACAGGGGCTTGCTTGGGAGACGAATGCAGACCTAGGCTCATCGGCTTTCTCGATTGCAACAATGTTGAAGTCTCTAACATTACTCTCAACCAACCTGCTTATTGGTGCTTACACTTGGTGCGGAGTAATAACATATCCATTCATGATATTGCAATTTATGGGGACTTCAATATACCAAACAATGATGGTATTGACATTGAGGACTCAAACAACACTGTAATCACTCGATGCCACATCGATACAGGGGATGATGCAATCTGTGCTAAGTCGTACACAGGTCCTGTTTACAACCTTACAGTCACCAACTCTTGGATTCGATCCAAATCTTCTGCAATTAAACTCGGCAGTGGTAGTTGGTTTGATTTCAAGCATTTTGTGTTTGACAATATCGCTATTGTTGATTCTCATAGAGGGATTGGATTCCAGATCCGTGATGGAGGAAATGTAAGTGACATTGTATTCTCAAACATAAACATCAGCACAAGATACTATGACCCGTTATGGTGGGGGAGAGCAGAGCCTATCTATGTCACGAGTTGCCCTCGAGACTCAACCTCAAAGGAGGCTTCAATCTCGCATGTACTTTTCATTAACATAACTGCAGATTCTGAAAATGGCATCTTCCTGTCTGGTTCAAAGAGAGGATTGTTAAGAAATTTGAGATTCATCAACATGGACATTACTTACAGAAGGTTCACCGGTTATGCTGGTGGGTTATTGGACTATAGGCCAGGGTGCCAAGAATTGGTTAAACACAGGACTGCAGGCATGATGATGGAGCACATTGAAGGTCTTGAGGTTAAAAATGTTGAAATGAGATGGTCAAACGATCAACTAGAGCAGTGGAATAATCCTCTAGAGTTCAGACCATCTACTGTGAATAACATTTCTTTCCTCAATTTTAATTCTGGTTTGTATACTACAAATAGCAAATGA 1395 0.4803 MDKPLHFFLLFFLLTPSLLATSHFPNPIPITLSVADFGAAADGLRYDTAAIQSAINSCPEGGPCHVTFPAPGKYLTATVFLKSGVVLNVEPGATILGGTRLEDYPKESSRWYVVVAENATDVGIRGGGVVDGQAAKFVVREDPRKNVMVSWNQTGACLGDECRPRLIGFLDCNNVEVSNITLNQPAYWCLHLVRSNNISIHDIAIYGDFNIPNNDGIDIEDSNNTVITRCHIDTGDDAICAKSYTGPVYNLTVTNSWIRSKSSAIKLGSGSWFDFKHFVFDNIAIVDSHRGIGFQIRDGGNVSDIVFSNINISTRYYDPLWWGRAEPIYVTSCPRDSTSKEASISHVLFINITADSENGIFLSGSKRGLLRNLRFINMDITYRRFTGYAGGLLDYRPGCQELVKHRTAGMMMEHIEGLEVKNVEMRWSNDQLEQWNNPLEFRPSTVNNISFLNFNSGLYTTNSK 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02618 464 Gene3D - 17 389 IPR012334 -
Pumo5g02618 464 SMART pbh1 195 221 IPR006626 -
Pumo5g02618 464 SMART pbh1 222 243 IPR006626 -
Pumo5g02618 464 SMART pbh1 339 364 IPR006626 -
Pumo5g02618 464 SMART pbh1 302 324 IPR006626 -
Pumo5g02618 464 SMART pbh1 248 269 IPR006626 -
Pumo5g02618 464 SUPERFAMILY Pectin lyase-like 24 389 IPR011050 -
Pumo5g02618 464 PANTHER PECTIN LYASE-RELATED 21 432 - -
Pumo5g02618 464 Pfam Glycosyl hydrolases family 28 64 382 IPR000743 GO:0004650|GO:0005975
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02618 30 460 Glycoside Hydrolase AT3G57790 68.707 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02618 - - gmx:100794954 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02618 5 72142419 72145368 Pumo5g02618 5 72142419 72145368 ECH