Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02617 ATGAAAGAAATTGAGAAGAGAAAAGCTTCAAGGAATAGTCAGACAAAGGGTTCAAGAAGAACCGAAAGGAGAGAGAATAAATTGCATCAAGATAATTCTTCCAAAACATTGAATGAAAAAGGAACTGAATCTAATACACCCCAGGATAGTAGACCAACTGCAAATAATTTTATAAGTGCTTCAAACACGGCCTCAGAGAATTCAGAAACTTATGAAAATGTGGTTATACATTATGTGGATGATGTCAACAGGTCTGAGGAGGCACTTGCCGAGATGAAAGTTAATGAAATGGTTGCTAATGAAAACAAAAATGAAGTGGCTGATGATCGTTCCAGTGATTTGGAGAAAGAGCAAAAGGAAGGGAATGAAGAAGTAGTCTCAGATGCTGAGACAGTAAAGGATTCAGTATCTTCTCAAGGTGATTCTTTCACAAATGAGGATGAGAGAACAGAAAAAGCTTCCAAAGATCCTAAAAGTAAGGTTAAAGTGAATCCTTCAGAAAGCAATCGTGGATCAAAGGAGAGATCTGATAGAAAAACAAATAAATTGCAATCAAAGGTATCAAATAGCAATCAAAAGAAACCTGTGAACTCAAATAAAGGGCCCTCCAAAGTTACAAACAAAAATGCTTCCTCAACCAATACCAAGACTGTGAAAGTTCCTGTAAATGTTTCATCAGAATCTTCTGAAGGTGTAGATGAAAAACCTGTTCAAGAGCTCAAGGAACTTGATATTGTGGATGGAACCTCCAACGGTGCTCAGAGTGTAGGAAGTGAAGATGAAAGTCATGAAACAGTTAATGCTGAAGAAAATGGTGAACATGAGGACAATGCAGCTGCGGAATTAAAAATTGAAGAAATGGAATTACGAATTGAAAAGCTCGAAGAGGAACTTAGAGAAGTTGCTGCTCTTGAAGTGTCACTTTATTCTATTGTACCAGAGCATGGCAGCTCAGCACACAAGGTGCACACACCTGCTCGGCGCCTTTCTAGGCTCTATATACATGCTTGCAAGCATTGGACCCAAAAAAGGCGAGCATCAATTGCCAAGAATACTGTTTCTGGCCTTATTTTGGTTGCCAAGTCTTGTGGTAATGATGTTTCAAGGTTAACTTTCTGGTTGTCAAATACCATTGTGCTGAGAGAGATAATTTCACAAGCTTTTGGGAATTCATGTCAAGCTAGTCCCCTTAAAAGGTTGGCTGAGTCAAATGGGGCTGGTAAGAGAAATGATGGGAAGTCTATGTCACTGAAATGGAAAGGTAGCTCCAATGGTAAACCAGGAAATGGTTTTATGCCTCTTGTTGAAGATTGGCAAGAAACAGGAACCTTAACATTTGCTTTAGAAAGAGTAGAATCATGGATCTTTTCTCGGATAGTGGAGTCAGTGTGGTGGCAGGCTTTGACTCCCTACATGCAAACTCCAGTTGGAGACTCTTCAAATAAATCCATTGGGAAGCTTATGGGACCTGCTCTGGGTGATCACAATCAAGGAAGCTTTTCTATCAATCTTTGGAGAAATGCTTTCCAAGATGCTTTTCAACGACTCTGTCCTGTTCGAGCAGGAGGGCATGAATGTGGTTGTTTGCCTGTGTTGGCTAGAATGGTCATGGAACAATGCATAGCTAGACTAGATGTTGCTATGTTCAATGCTATTCTTCGGGAGTCAGCCCTTGAGATCCCAACCGATCCTGTATCAGACCCTATTGTGGATTCGAAGGTTTTGCCAATTCCAGCTGGAGATTTAAGCTTTGGGTCTGGTGCACAGCTAAAAAATTCTGTTGGCAATTGGTCTAGATGGCTTACTGACATGTTTGGCATGGATGCTGAAGATTGTCTGCAAGAAGATCAGGAGAACAGTGAGAATGATGAAAAGCAGGGTGGAGATGGTGAACCTAAATCTTTTGTTCTCCTTAACGACTTGAGTGACCTTCTGATGCTACCTAAAGACATGCTTATGGATAGAAATATCAGACAGGAGGTGTGTCCATCCATCAGTCTTTCATTGATTATACGGGTTCTCTGTAACTTCACTCCAGATGAGTTCTGTCCAGACCCTGTTCCAGGAACTGTCTTGGAGGACCCTGAATGCGGAGACTATTATAGAGCGAAGATTATCAGCAGAATCTGTAAGAAGCTTCCCTTATGTGGCTGCTCATGTTGTGTATATGCCTCCCTCCTCTGCTAA 2187 0.4102 MKEIEKRKASRNSQTKGSRRTERRENKLHQDNSSKTLNEKGTESNTPQDSRPTANNFISASNTASENSETYENVVIHYVDDVNRSEEALAEMKVNEMVANENKNEVADDRSSDLEKEQKEGNEEVVSDAETVKDSVSSQGDSFTNEDERTEKASKDPKSKVKVNPSESNRGSKERSDRKTNKLQSKVSNSNQKKPVNSNKGPSKVTNKNASSTNTKTVKVPVNVSSESSEGVDEKPVQELKELDIVDGTSNGAQSVGSEDESHETVNAEENGEHEDNAAAELKIEEMELRIEKLEEELREVAALEVSLYSIVPEHGSSAHKVHTPARRLSRLYIHACKHWTQKRRASIAKNTVSGLILVAKSCGNDVSRLTFWLSNTIVLREIISQAFGNSCQASPLKRLAESNGAGKRNDGKSMSLKWKGSSNGKPGNGFMPLVEDWQETGTLTFALERVESWIFSRIVESVWWQALTPYMQTPVGDSSNKSIGKLMGPALGDHNQGSFSINLWRNAFQDAFQRLCPVRAGGHECGCLPVLARMVMEQCIARLDVAMFNAILRESALEIPTDPVSDPIVDSKVLPIPAGDLSFGSGAQLKNSVGNWSRWLTDMFGMDAEDCLQEDQENSENDEKQGGDGEPKSFVLLNDLSDLLMLPKDMLMDRNIRQEVCPSISLSLIIRVLCNFTPDEFCPDPVPGTVLEDPECGDYYRAKIISRICKKLPLCGCSCCVYASLLC 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02617 728 MobiDBLite consensus disorder prediction 402 425 - -
Pumo5g02617 728 MobiDBLite consensus disorder prediction 1 36 - -
Pumo5g02617 728 Coils Coil 277 304 - -
Pumo5g02617 728 MobiDBLite consensus disorder prediction 102 130 - -
Pumo5g02617 728 MobiDBLite consensus disorder prediction 144 182 - -
Pumo5g02617 728 MobiDBLite consensus disorder prediction 37 71 - -
Pumo5g02617 728 MobiDBLite consensus disorder prediction 1 71 - -
Pumo5g02617 728 MobiDBLite consensus disorder prediction 183 231 - -
Pumo5g02617 728 MobiDBLite consensus disorder prediction 95 272 - -
Pumo5g02617 728 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 266 693 IPR021827 GO:0005643
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02617 Pumo-Chr5 72119653 72125684 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02617 - - gmx:100804499 1225.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02617 5 72119653 72125684 Pumo5g02617 5 72119653 72125684 ECH