Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02609 ATGCAAATGGGAACTCTTTCTTCATTCATAGTATTTAGTTACTCATCATATAACAACAAGAGTTTTCTACCGGATGGAGTGGAAGATGTGTTTCCATATTATTTATTGTCTCAGGCGATATGCTATGTCGTTCTAAGGCCGGTGTCGAAGAATTTGTACAGACGGATCAACCGGGTAGTAGCAGAACTCTTGTGGCTCGAACTTGTATGGCTTATTGATTGGTGGGCAGGAGTTAAGGTCCAAATATTCACAGATCGTGAAACCTTTCGTTTAATGGGTAAAGAGCATGCACTTGTAATAAGCAATCACAGAAGTGATATTGATTGGCTTGTTGGATGGGTTTCAGCTCAGCGCTCAGGTTGTCTTGGCAGCACTCTAGCTGTGATGAAGAAATCTTCAAAGCTTCTGCCGGTCATTGGCTGGTCAATGTGGTTTTCTGAGTATCTTTTTCTGGAGAGAAGTTGGGCCAAGGATGAAAGCACATTAAGGTCAGGCATCCAACGACTGAGTGATTTCCCTCTTCCCTTTTGGTTGGCTCTCTTTGTAGAAGGAACACGCTTTACACAGGCCAAACTATTAGCTGCTCAGGAATATGCAACTTCCACTGGATTGCCTGTTCCTAGAAATGTTTTGATTCCAAGAACTAAGGGTTTTGTTTCTGCAGTAAGTCATATGCGCTCATTTGTTCCTGCCATTTATGATGTAACAGTAGCTATCCCTAAAAGTTCCTCTGCTCCTACAATGCTAAGACTCTTCAAGGGGCAACCTTCAGTGGTGCATGTTCATATCAAGAGGCATTTGATGAACGAATTGCCAGAAACAGATGAGGCTGTTGCTCAATGGTGTCGAGATATATTTGTGGCCAAGGATGCTTTGTTAGACAAACATATAGCTGAGGATACTTTTAGTGATCAAGAGCTGCAATATACTGGTCGACCAATAAAGTCTCTTCTGGTAGTTGTATCTTGGGCTTGTCTTCTTGTTGCGGGGTCTGTGAAGTTCCTACAACGGTCTTCGCTACTCTCTTCATGGAAGGGTGTTGCATTTTCAGCTTTTGGTTTGGCAGTTGTTACTGCACTTATGCAAATTCTGATTCAATTCTCACAGTCAGAGCGTTCAAACCCTGCCAAGATCGCCCCTGCAAAGTCAAAAAACAAGGGGGAACAACTAGAGGCTAGGAATGACAAACAACAGTAG 1197 0.4286 MQMGTLSSFIVFSYSSYNNKSFLPDGVEDVFPYYLLSQAICYVVLRPVSKNLYRRINRVVAELLWLELVWLIDWWAGVKVQIFTDRETFRLMGKEHALVISNHRSDIDWLVGWVSAQRSGCLGSTLAVMKKSSKLLPVIGWSMWFSEYLFLERSWAKDESTLRSGIQRLSDFPLPFWLALFVEGTRFTQAKLLAAQEYATSTGLPVPRNVLIPRTKGFVSAVSHMRSFVPAIYDVTVAIPKSSSAPTMLRLFKGQPSVVHVHIKRHLMNELPETDEAVAQWCRDIFVAKDALLDKHIAEDTFSDQELQYTGRPIKSLLVVVSWACLLVAGSVKFLQRSSLLSSWKGVAFSAFGLAVVTALMQILIQFSQSERSNPAKIAPAKSKNKGEQLEARNDKQQ 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02609 398 MobiDBLite consensus disorder prediction 373 398 - -
Pumo5g02609 398 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 61 297 - -
Pumo5g02609 398 Pfam Acyltransferase C-terminus 250 323 IPR032098 -
Pumo5g02609 398 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 35 369 - -
Pumo5g02609 398 CDD LPLAT_LCLAT1-like 73 264 - -
Pumo5g02609 398 SMART plsc_2 97 219 IPR002123 GO:0016746
Pumo5g02609 398 MobiDBLite consensus disorder prediction 384 398 - -
Pumo5g02609 398 Pfam Acyltransferase 91 239 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02609 Pumo-Chr5 71534191 71546749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02609 36 396 Miscellaneous Gene Families AT3G57650 74.317 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02609 K13523 - gmx:100792858 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02609 5 71534191 71546749 Pumo5g02609 5 71534191 71546749 ECH