Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02605 ATGAACAGCATCTCATCACTGACCCTTGATTCTCGCGCAATATGCAAACCCCACCACCTCATCTCCTCCCGCCACGTTCCTCCCACTCGAAACGTCGTCGTCTGCTCCGCGAAGCCAGCCGCGCCTCCCCCCACCAAGCTCGCCGCCGCCGACACCTCCGGCCGCCGCATCGGCGCGCTCAGCCAGGTCTCCGGCGTGCTGGGCTGCCAGTGGGGCGACGAGGGCAAAGGGAAGCTCGTCGACATATTGGCCCAACACTTCGAAATCGTTGCTCGCTGCCAGGGTGGAGCTAATGCTGGGCATACTATTTACAATGCAGAAGGGAAAAAGTTCGCTCTTCATCTTGTTCCTTCTGGTATTCTCAATGAGGATACTCTGTGTGTTATTGGGAATGGGGTTGTAGTGCACCTGCCGGGGTTGTTTAAAGAGATTGATGGTCTTGAATCGAATGGGGTCTCTTGCAAGGGAAGGATATTGATATCTGATCGTGCTCACCTGTTGTTTGATTTCCACCAAGTGGTGGATGGGCTAAGAGAAGCCGAGCTTGCTAAATCTTTCATTGGCACCACCAAGAGAGGCATTGGACCCTGCTACTCCAGCAAGGTTAACCGTAATGGCATCCGAGTGGGTGATTTGAGGCACATGGATACTTTTCCTCAGAAACTTGATCTTATATTGTCAGATGCAGCACTGAGGTTCAAAGATTTTAACTATGGTCCGGATGTGCTCAGGGAAGAAGTTGAAAAATACAAGAGATATGCTGAGAGGTTGGAACCCTTTATTGCTGATACTGTGCATGTCATGAATGATGCCATAGCACAAGAGAAGAAGATTTTGGTTGAAGGAGGACAAGCAACCATGTTGGATATTGATTTTGGAACTTATCCCTTTGTTACTTCTTCTAGCCCATCAGCAGGTGGGATATGCACTGGTCTTGGTATTGCTCCAAGGATAGTTGGTGATTTAATCGGAGTGGTGAAGGCATACACTACAAGAGTTGGTTCTGGTCCTTTCCCAACTGAAATTTTGGGTTCAGGAGGTGATCTCCTCAGATTTGCTGGGCAGGAGTTTGGCACAACTACTGGCCGTCCTCGACGGTGTGGTTGGCTCGATATAGTTGCACTGAAATTCTCATGTCAGATCAATGGTTTTTCGTCATTGAATCTTACCAAGCTGGATGTTTTATCAGATCTTGAAGAAATACAGTTGGGTGTCTCATACAAACTTGCTGATGGCACCCCAATCAAATCATTCCCTTCAGATCTCCGTCTTCTTGAGCAATTGAAGGTGGAATATGAAGTACTTCCCGGATGGAAGACTGATATTTCTTCCATAAGAAACTATTCTGACCTTCCAAAAGCTGCAAGGCAGTATGTGGAAAGGATAGAAGAACTTGTGGGGGTCCCTATTCACTACATTGGTGTTGGGCCTGGACGTGATGCCCTCATATACAAATGA 1458 0.4808 MNSISSLTLDSRAICKPHHLISSRHVPPTRNVVVCSAKPAAPPPTKLAAADTSGRRIGALSQVSGVLGCQWGDEGKGKLVDILAQHFEIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTLCVIGNGVVVHLPGLFKEIDGLESNGVSCKGRILISDRAHLLFDFHQVVDGLREAELAKSFIGTTKRGIGPCYSSKVNRNGIRVGDLRHMDTFPQKLDLILSDAALRFKDFNYGPDVLREEVEKYKRYAERLEPFIADTVHVMNDAIAQEKKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRIVGDLIGVVKAYTTRVGSGPFPTEILGSGGDLLRFAGQEFGTTTGRPRRCGWLDIVALKFSCQINGFSSLNLTKLDVLSDLEEIQLGVSYKLADGTPIKSFPSDLRLLEQLKVEYEVLPGWKTDISSIRNYSDLPKAARQYVERIEELVGVPIHYIGVGPGRDALIYK 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02605 485 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 484 IPR027417 -
Pumo5g02605 485 NCBIfam adenylosuccinate synthase 66 483 IPR001114 GO:0000166|GO:0004019|GO:0006164
Pumo5g02605 485 PANTHER ADENYLOSUCCINATE SYNTHETASE 51 485 IPR001114 GO:0000166|GO:0004019|GO:0006164
Pumo5g02605 485 Gene3D Adenylosuccinate Synthetase, subunit A, domain 2 162 260 IPR042110 -
Pumo5g02605 485 Gene3D Adenylosuccinate Synthetase, subunit A, domain 1 66 325 IPR042109 -
Pumo5g02605 485 ProSitePatterns Adenylosuccinate synthetase active site. 193 204 IPR033128 -
Pumo5g02605 485 CDD AdSS 62 484 IPR001114 GO:0000166|GO:0004019|GO:0006164
Pumo5g02605 485 FunFam Adenylosuccinate synthetase, chloroplastic 162 260 - -
Pumo5g02605 485 ProSitePatterns Adenylosuccinate synthetase GTP-binding site. 70 77 IPR018220 GO:0005525
Pumo5g02605 485 FunFam Adenylosuccinate synthetase 326 485 - -
Pumo5g02605 485 Pfam Adenylosuccinate synthetase 66 483 IPR001114 GO:0000166|GO:0004019|GO:0006164
Pumo5g02605 485 Gene3D Adenylosuccinate Synthetase, subunit A, domain 3 326 485 IPR042111 -
Pumo5g02605 485 Hamap Adenylosuccinate synthetase [purA]. 1 485 IPR001114 GO:0000166|GO:0004019|GO:0006164
Pumo5g02605 485 SMART adenylsucc_synt 63 484 IPR001114 GO:0000166|GO:0004019|GO:0006164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02605 K01939 - gmx:100792329 921.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02605 5 71502321 71505339 Pumo5g02605 5 71502321 71505339 ECH