Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02576 ATGTGTGTGTCAAAGTTCAAACTCTTACGAGTTTTGGATTTAAGTTATTCAGCATGCAAGACTTTGCCCCGTTCCATTGGTAAGTTGAAACACTTGAAATATTTCAGCATTATAAATAATTATAATATTAAGAGACTCCCTGATTCTATTTGCAAGCTCCAAAACTTGCAAGTGTTGAAACTTAGTGGATGCAAGGAGCTGGAAGCATTGCCCAAAGGATTAAGAAAATTGATCAGTCTCCGGCATTTGGAGATAACCACAAAACAATCTGTCTTTCCTGCCAATGAGATTGCCAACTTGAGCTTGCTTGATTTTCTGGATATTCGTTCATGCCATAATCTGGAGTCTATCTTCGGAGGGGTGAAATTCCCTGCTCTTAAAACGTTGTTTGTTGCTTGTTGTAGTAGTATAAAGTCTTTGCCGCTGGATGTTAAAAATTTTCCTGAATTAGAAACTTTGTTTGTTGGATACTGTGGTAATTTGGACTTGGAACTGTGGAAGGACCAACATGAAGAACAAAGCCCCAAGTTGAAGTTAAAATATGTTCAATTTGTAGGTTTACCACAGCTGGTGACCTTGCCTCAATGGCTTCAAGAAACTGCCAACTCCCTACACTCCTTGTTAATTTTTAAGTGCGACAATCTTGAAATGCTTCCGGAGTGGCTGTCAACTCTGACTAATCTGAAAACACTTGGTATAAGAGATTGTCCAAAGCTTCTATCTCTCCCTGATAACATCCAGCACCTCACCGCACTTGAATATTTGAAAATTACAGGTTGTCCTGAATTATGTAGAAAATGTCAGCCCCATGTTGGAGAGTGTTGGCCCAAAATATCACATATCAAAAAGGTTATCATTGAAGAACCCGAAGAACTCGAGAAAGAGTAA 888 0.3885 MCVSKFKLLRVLDLSYSACKTLPRSIGKLKHLKYFSIINNYNIKRLPDSICKLQNLQVLKLSGCKELEALPKGLRKLISLRHLEITTKQSVFPANEIANLSLLDFLDIRSCHNLESIFGGVKFPALKTLFVACCSSIKSLPLDVKNFPELETLFVGYCGNLDLELWKDQHEEQSPKLKLKYVQFVGLPQLVTLPQWLQETANSLHSLLIFKCDNLEMLPEWLSTLTNLKTLGIRDCPKLLSLPDNIQHLTALEYLKITGCPELCRKCQPHVGECWPKISHIKKVIIEEPEELEKE 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02576 295 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 5 87 - -
Pumo5g02576 295 Gene3D Ribonuclease Inhibitor 1 174 IPR032675 -
Pumo5g02576 295 Gene3D Ribonuclease Inhibitor 175 279 IPR032675 -
Pumo5g02576 295 Pfam Leucine rich repeat 9 65 IPR001611 GO:0005515
Pumo5g02576 295 SUPERFAMILY L domain-like 4 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02576 Pumo-Chr5 70886760 70887647 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02576 15 145 Receptor kinase-like Gene Family AT2G23950 34.014 1.28e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02576 - - gmx:100305368 435.647