Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02569 ATGTCGTCATTCGCGGCGGTGCATCTCCAATCTCCGATCAACGCCTCCTCCGACGCGCCGCCGCCACCGCCACCGCCACCGCATTCTCCGTTCCTCCATTTCAATGCCGACTGCTTAAACCCTTCCGCCGCCGCCGCCGCCACCCCCGCCGCTCGCACGAGGTCGAGGCCGAGACTCGCCAAGCTGAGGAAGCAGTCCGCGTCGCAGCATGCCAGGTCCCGGAGCCGAACCTCCGCCACCGGCGACGACGGCTCCGGCGCCGGCTTCAATCCGTTTCGCTCCGATCAGGTAACCGGTAATGTTAATAGTGGAGTGGAGAGTGGTTCCGGTGGTGGTAATTTTGTGTTTGGGGCTGGGAAGGGCGATTCTGATTCCGCTAGGGATTTGAAGGGGCCGAGTGAGGGAGAAATTGGGGAGAGTGGTGGCGTGGAATTTGCGTTTAGTGCTAAACGGAGTGAGGATGAACTGAAAAAGAAAAATGAAAATGTTACAGAGACCGTTTCTGGTGAGGGAAGGAAGGTGGTGTCGAATTCAGAGGGGGAGCAGGGGGAATTGAATAGTAGGGAGTTTGTTTTTGGTGCTTGTAGAAACAATTTGGATTCTGGCTCCAAGGGGAAATCTGGTGTACATGTGAGAAATTCGGGGTTTGATAATGGTGGGGTGAGGGAATATAAGACTGAATTTGAGTGTGGAAAGCATGATTGTAATGTTAATAATGTGGAGAAGCCGGAGCATGTTGGTAGTATGTGGAATTCGGATTGTGGAATGGGTGCTTTTGGTGTTAAGGTGGGAGTGAATGGTAATAGTGATACAGGTGCTGATCGGTGTGATAATTTGGGTGATGGTGGTAAATGCGAGAGTCGGTATGAAAGTCTTAATGGTATTGCTGCTGCTTATAGTGACGATCCAGTGCGTAATTTATCAGATGAGATGGAGAAACTGAACATCAATCATTCTGAGGGTGCTGATATCGCCAGAGATTCGGCGAATTCACGTGCAAATGGTAGTGCTGGTTTTGTGTTTGGAGCAAGTGACAAGGTTTTTGGCTATTCTAGTGTCAGTTCAAGAACTGATGCTGGTGGTCAGCAGTCTTGTGCTCATGCTGCTTTTGAGAATATTGGTGGGCAAAATGGAACTGCTTGTGGTATTGCCTGTGGTTCTGCAGGAATACATTGCTCTAATAAGCCATCCACTAGTCAGGAAGGCGTCAGAGATTTCCAGTGTGGCAAAATTCCAGAATTTAACGTGTCTGAAGATTCAAAAGTGAATGGAGCTGCAGCATCGTTTTCCTTCTCATCATTTGGTTTTGATTCCCATCCAAATTATCATGGTTCCATGGGCCATTCCTCAAGTGCAGATAATGATAAGGATGAAAATTGTTTTGCAAGTACTCCAGAGGCTTCCAAAGATTCTTTTGTGGACTTCAAACCCCCGACATGGGATCCGTCTTGTTTCAAAGAAAACCTATTTCCTAAGTTAAATAAAGAAGTTGAATCCACACCGAAGGGCCGATCTTGTAAGGGAAAAGGATCAAAATGTATGAGGCGAAAATTGAAGCCACATTCCGTAAATAAGAAACAGTCAGGGCTAGATCATTTGTCGAAGGAAAACAGTTCACAGAAAACCCCTGATTCTTCTGGTATCCACTCACCCATGGATTTTTCTCCCTACCAGGAAACAACAGCAAGTGATCATGTAAAAGTTTCTGAAAAATTAAATGATCTGCATTCAACAATTCCTACTGATCGAAGTGGTAGTGTAGCAGGTGCTTCGGCAGATGCTGGGGTTGACTTCACCTCAAACACTGAAAAGCAAAAGGATGATGTATTTCGTTTTGTTCATGGTGTTAATGATTCAAAGGGGAAAGATTTTGCATTTTCTGCTTCGTCATCTGTGGAGGGTACTCCATCATTAAAGCGTCAGCAGAAGAAGAAATTTAGGAGAAAAATGGGGTGCAACTCTTTTGTTATCTCTCCTCGTGTGAAAGGAAACTTTGTACAATTCAAGGAAGGGGATGTTGCATCATCAGATGTAATTCCAGCAGCCTGTGACACGTGGAGACTCAGGGGGAACCAGGCTCATAAAGATGGGGATCTTTCTAAAGCCGAGGACTTCTACTCACGAGGAATAAATTCTGTCCCGTCAAGTGAAAGATCAGGATGCTGGGATAAGCCTCTTTTACTGTGCTATAGTAACCGTGCAGCAACACGAATGAGTCTTGGAAGGATTAGAGAAGCTCTAGAGGATTGCATGATGGCTACATCTCTGGACCCCACCTTTATTAAAGTACAGATGAGAACTGCTAACTGTCACCTTTTGCTAGGGGAAGTAGAAAATGCTCAGCAGTGTTTTAACAAGTGCACGGAATCAGTTAGTGTTGTTTGTTTGGATCGGAGGGTTATAGTTGAAGCAGCTGAAGGTTTACAGAAGGCTCAGGAAGTGGTTAAGTGTATAAATAATGCTGCTGAACTTTTAAAAGAGAGGACTTCTGATGCAGCTGTTACTGCTTTAGAACTAGTTTCTAAGGCATTGTCAATAAGTTTATACTCAGAAAAATTGCTTCAAATGAAGGCAGAGGCTCTATGTTTGCTACAAAAGTATGATGCAGCAATTCAGCTTTGTGAACAGAGTCAGCATCTTGCAGAAAAGAATTTTGTCTTGGCAAACAATGCAGAGAATTCTGATAGTTCCTTAAGTGATAGTTACTCAAGTGTAAAATTGTGGAGGTGGTCATTGATATCCAAGTGTTACTTTCGTTTGGGAAGGCTTGAAGCATCACTTAATGTTCTCGAGAAATTACAGCAAGTTGTGTCTGTCACTGACAAGTGTGTGATTGATAACATGGAAGACTTGCTGACATTAGCTTCTACAATACGAGAACTTCTGGACCACAAGAGGGCAGGAAATGAAAATTTTAAATTGGGAAAGTATACGGAAGCTGTAGAGAATTACACTGCTGCTTTATCATGCAATATTAAATCACGACCTTTTATGGCAATATGTTTCTGCAACCGTGCTGCAGCTCATCAAGCTTTGGGTCAAATTGCTGATGCCATTGCAGACTGCAGTGTTGCTATTGCCCTTGATGGAAATTATGCAAAGGCAATTTCAAGAAGAGCCACCTTACATGAGATGGTTAGAGATTATGAACAAGCAGCTTGTGACCTCAAGAGACTTATAGCTGTTCTTGAATCTCAATCCAATGAAAGGGCCAAACAATCTGACTTACCCAGTGGATCTAATGGTGTGAGAGAATCAAGGCAAGCTCATCAACGCCTGCTTTCAGTGGAAGATCAAGCCAAAAAGGGAACACCCTTGGATTTTTACCTCATTTTAGGAATCAAATCAGCTGATACAGCAACAGATATCAAGAAGGCATACCACAAGGCAGCTCTCAGACATCATCCAGACAAGGCTGGTCAGTTGTTGGCTAGAAGTGAAGTTGGAGATGAAGGCCGACTTTGGAAGGAAATTTCACAGGAGGTGTACAAGGATGCTGATAAGCTTTTCAAAATGATTGGGGAAGCATATGCTGTGCTTTCAGACCCAGCCAAGCGCTCGGAGTATGATTTGGAAGAGGAGATAAGGAAAGCTTCTAAGTTATGTAACAGAGGTGGCACAAGCAGGAAATCTTCAGATGCTTATGGGTGTGGAGGACCGTGTGATGGTTACAAACCTTCCTCTGACAGAACTTCTAGCAGACGAAATGGAAGGGATCATTGGAAGACCTATGGACATTCATATTCTCGATGGCCATGA 3759 0.4451 MSSFAAVHLQSPINASSDAPPPPPPPPHSPFLHFNADCLNPSAAAAATPAARTRSRPRLAKLRKQSASQHARSRSRTSATGDDGSGAGFNPFRSDQVTGNVNSGVESGSGGGNFVFGAGKGDSDSARDLKGPSEGEIGESGGVEFAFSAKRSEDELKKKNENVTETVSGEGRKVVSNSEGEQGELNSREFVFGACRNNLDSGSKGKSGVHVRNSGFDNGGVREYKTEFECGKHDCNVNNVEKPEHVGSMWNSDCGMGAFGVKVGVNGNSDTGADRCDNLGDGGKCESRYESLNGIAAAYSDDPVRNLSDEMEKLNINHSEGADIARDSANSRANGSAGFVFGASDKVFGYSSVSSRTDAGGQQSCAHAAFENIGGQNGTACGIACGSAGIHCSNKPSTSQEGVRDFQCGKIPEFNVSEDSKVNGAAASFSFSSFGFDSHPNYHGSMGHSSSADNDKDENCFASTPEASKDSFVDFKPPTWDPSCFKENLFPKLNKEVESTPKGRSCKGKGSKCMRRKLKPHSVNKKQSGLDHLSKENSSQKTPDSSGIHSPMDFSPYQETTASDHVKVSEKLNDLHSTIPTDRSGSVAGASADAGVDFTSNTEKQKDDVFRFVHGVNDSKGKDFAFSASSSVEGTPSLKRQQKKKFRRKMGCNSFVISPRVKGNFVQFKEGDVASSDVIPAACDTWRLRGNQAHKDGDLSKAEDFYSRGINSVPSSERSGCWDKPLLLCYSNRAATRMSLGRIREALEDCMMATSLDPTFIKVQMRTANCHLLLGEVENAQQCFNKCTESVSVVCLDRRVIVEAAEGLQKAQEVVKCINNAAELLKERTSDAAVTALELVSKALSISLYSEKLLQMKAEALCLLQKYDAAIQLCEQSQHLAEKNFVLANNAENSDSSLSDSYSSVKLWRWSLISKCYFRLGRLEASLNVLEKLQQVVSVTDKCVIDNMEDLLTLASTIRELLDHKRAGNENFKLGKYTEAVENYTAALSCNIKSRPFMAICFCNRAAAHQALGQIADAIADCSVAIALDGNYAKAISRRATLHEMVRDYEQAACDLKRLIAVLESQSNERAKQSDLPSGSNGVRESRQAHQRLLSVEDQAKKGTPLDFYLILGIKSADTATDIKKAYHKAALRHHPDKAGQLLARSEVGDEGRLWKEISQEVYKDADKLFKMIGEAYAVLSDPAKRSEYDLEEEIRKASKLCNRGGTSRKSSDAYGCGGPCDGYKPSSDRTSSRRNGRDHWKTYGHSYSRWP 1252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02569 1252 SMART tpr_5 961 994 IPR019734 GO:0005515
Pumo5g02569 1252 SMART tpr_5 851 884 IPR019734 GO:0005515
Pumo5g02569 1252 SMART tpr_5 999 1032 IPR019734 GO:0005515
Pumo5g02569 1252 SMART tpr_5 1033 1066 IPR019734 GO:0005515
Pumo5g02569 1252 SMART tpr_5 683 716 IPR019734 GO:0005515
Pumo5g02569 1252 SMART tpr_5 727 760 IPR019734 GO:0005515
Pumo5g02569 1252 SMART tpr_5 761 794 IPR019734 GO:0005515
Pumo5g02569 1252 MobiDBLite consensus disorder prediction 1 15 - -
Pumo5g02569 1252 MobiDBLite consensus disorder prediction 1 143 - -
Pumo5g02569 1252 SMART dnaj_3 1106 1185 IPR001623 -
Pumo5g02569 1252 Gene3D Tetratricopeptide repeat domain 960 1079 IPR011990 GO:0005515
Pumo5g02569 1252 MobiDBLite consensus disorder prediction 533 563 - -
Pumo5g02569 1252 Gene3D DnaJ domain 1094 1208 IPR036869 -
Pumo5g02569 1252 MobiDBLite consensus disorder prediction 16 31 - -
Pumo5g02569 1252 SUPERFAMILY Chaperone J-domain 1099 1189 IPR036869 -
Pumo5g02569 1252 ProSitePatterns Nt-dnaJ domain signature. 1170 1189 IPR018253 -
Pumo5g02569 1252 SUPERFAMILY TPR-like 964 1062 IPR011990 GO:0005515
Pumo5g02569 1252 Coils Coil 1049 1069 - -
Pumo5g02569 1252 MobiDBLite consensus disorder prediction 91 109 - -
Pumo5g02569 1252 MobiDBLite consensus disorder prediction 56 70 - -
Pumo5g02569 1252 Gene3D Tetratricopeptide repeat domain 667 939 IPR011990 GO:0005515
Pumo5g02569 1252 SUPERFAMILY TPR-like 680 934 IPR011990 GO:0005515
Pumo5g02569 1252 Coils Coil 808 828 - -
Pumo5g02569 1252 MobiDBLite consensus disorder prediction 1228 1245 - -
Pumo5g02569 1252 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 23 1251 - -
Pumo5g02569 1252 ProSiteProfiles dnaJ domain profile. 1107 1193 IPR001623 -
Pumo5g02569 1252 MobiDBLite consensus disorder prediction 496 563 - -
Pumo5g02569 1252 PRINTS DnaJ domain signature 1109 1127 IPR001623 -
Pumo5g02569 1252 PRINTS DnaJ domain signature 1127 1142 IPR001623 -
Pumo5g02569 1252 PRINTS DnaJ domain signature 1165 1185 IPR001623 -
Pumo5g02569 1252 MobiDBLite consensus disorder prediction 508 523 - -
Pumo5g02569 1252 CDD DnaJ 1107 1182 IPR001623 -
Pumo5g02569 1252 Pfam DnaJ domain 1107 1190 IPR001623 -
Pumo5g02569 1252 MobiDBLite consensus disorder prediction 1203 1252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02569 Pumo-Chr5 70645446 70655953 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02569 K09527 - gmx:100809278 2070.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02569 5 70645446 70655953 Pumo5g02569 5 70645446 70655953 ECH