Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02567 ATGGTGTCATCAAAACCTGGTGGCTTCTATGCACAAGGGAGCTTTCCATCACTCAAAATCCTCATACTTGTACTCCTTAATTCTATACTTCACAAAGCCAACTCAGGCTGCAACAACTCTGCTTCCAATTCCTTAGTTCCATTTCCACCTCATGAGATCCTCTCATCACTGGAAACACTACCTTTAGATGGCCTCTTTAGCCTAAGGGATAATGGGGATGCTGCCAAGGACTTTGGCAACATACACCATTTTCCTCCCCTAGCAGTGCTGCATCCAAAAACAGTTTCTGACATATCACTCACCATCAAGCATGTTTTTGAAATGGGGTTTGCCTCACAGTTGAAGGTTGCTGCTAGAGGCCATGGCCATTCACTTCAAGGCCAGGCACAGGCACATAGAGGCCTAATCATTAACATGGAGTCACTGCAGGGTCCTGAAATGAAAGTTTTCAATGGAGAATTGCCTTATGTGGATGTCTCAGGGGGTGAGTTGTGGATAAACATTCTGCATGAAACTCTTAAACATGGGTTGGCACCAAAGTCTTGGACAGATTACCTTCATCTCACTGTTGGGGGCACTCTTTCAAATGCTGGAATAAGTGGGCAAGCCTTCAAGCATGGACCTCAGATCAATAACATCTTTCAGCTTGAAGTGATCACAGGAAAAGGAGAGGTGGTTACCTGCTCAGGGAACCGAAATGCTGACCTTTTTTATGGTGTTCTTGGAGGGCTTGGTCAATTTGGCATCATTACAAGGGCTAGAATTTCTCTTGAACCAGCACCTAAGATGGTGAAATGGATTAGAGTGCTCTACTCAGAATTCTCTACATTTACTAGGGATCAAGAGTACTTGATATCACTAAAAAACACATTTGATTATATTGAAGGGTTTGTGATCATAAACAGAACTGGCATCCTTAACAATTGGAGATCATCCTTTGATCCCAAAAACCCACTTCAAGCCAGCCAATTCAGTTCTGATGGGAAAACCTTCTACTGTCTAGAGATGGCAAAATACTTCAACCCTGATGAAGCTGAAGCCATGAATCAGAGTGTTGATCACCTACTGTCAAAGCTGAGTTACATTCCATCCACACTCTTCCTATCAGAAGTTTCTTACGTGGAATTCTTAGACAGAGTGCATGTTTCTGAGAAAAAGCTAAGAGGCAAAGGCTTGTGGGAAGTTCCCCATCCTTGGCTGAACCTTCTGATCCCAAGGAGTGAGATTCATGACTTTGCTGAAGAAGTATTTGGCAATATTCTTAAAGACACAAGTAATGGTCCCATACTCATTTACCCCGTCAACCAAACAAGGTGGAATATTAAAAAAGCATCATTGGTTACCCCAGAGGAAGATGTTTTTTACATGGTGGCATTCCTATCCTCAGCACTCCCAAATTCTACAGGAGCAGATAGTTTAGAACACATTCTAGCCCAAAACAAAAGGATCATAGATTTCTACACCCGTGCCCAACTGAAAGTGAAGCAATACCTTCCCCATTACAGCACACAGGGAGAATGGCAAGCCCACTTTGGGCCACGATGGGAGACATTCGTGGAAAGAAAAAGGACCTATGACCCACTAGCACTGCTAGCCCCTGGCCACAGAATCTTTCAAAAGGCAGTGTCATCTTCATGTTAG 1641 0.4351 MVSSKPGGFYAQGSFPSLKILILVLLNSILHKANSGCNNSASNSLVPFPPHEILSSLETLPLDGLFSLRDNGDAAKDFGNIHHFPPLAVLHPKTVSDISLTIKHVFEMGFASQLKVAARGHGHSLQGQAQAHRGLIINMESLQGPEMKVFNGELPYVDVSGGELWINILHETLKHGLAPKSWTDYLHLTVGGTLSNAGISGQAFKHGPQINNIFQLEVITGKGEVVTCSGNRNADLFYGVLGGLGQFGIITRARISLEPAPKMVKWIRVLYSEFSTFTRDQEYLISLKNTFDYIEGFVIINRTGILNNWRSSFDPKNPLQASQFSSDGKTFYCLEMAKYFNPDEAEAMNQSVDHLLSKLSYIPSTLFLSEVSYVEFLDRVHVSEKKLRGKGLWEVPHPWLNLLIPRSEIHDFAEEVFGNILKDTSNGPILIYPVNQTRWNIKKASLVTPEEDVFYMVAFLSSALPNSTGADSLEHILAQNKRIIDFYTRAQLKVKQYLPHYSTQGEWQAHFGPRWETFVERKRTYDPLALLAPGHRIFQKAVSSSC 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02567 546 Gene3D - 139 262 IPR016169 -
Pumo5g02567 546 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 86 121 IPR006093 GO:0016491
Pumo5g02567 546 FunFam Cytokinin dehydrogenase 1 139 262 - -
Pumo5g02567 546 SUPERFAMILY FAD-binding/transporter-associated domain-like 73 259 IPR036318 GO:0050660
Pumo5g02567 546 Gene3D - 72 538 IPR016167 -
Pumo5g02567 546 FunFam Cytokinin dehydrogenase 2 263 497 - -
Pumo5g02567 546 Pfam FAD binding domain 86 229 IPR006094 GO:0050660
Pumo5g02567 546 SUPERFAMILY FAD-linked oxidases, C-terminal domain 261 538 IPR016164 GO:0003824|GO:0050660
Pumo5g02567 546 Gene3D - 263 497 IPR016170 -
Pumo5g02567 546 ProSiteProfiles PCMH-type FAD-binding domain profile. 82 260 IPR016166 GO:0071949
Pumo5g02567 546 PANTHER GULONOLACTONE OXIDASE 47 539 - -
Pumo5g02567 546 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 261 538 IPR015345 GO:0009690|GO:0019139|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02567 Pumo-Chr5 70630878 70633890 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02567 K00279 - gmx:100777568 1026.54