Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02553 ATGGGGTCAGAAACCGAAGTGAAGCTTCCAATTATTGACTTCTCCATTGTGGACTTAGAGTCCAATGTTGCAGAGTGGGAATCAGTGAAATCCCAAGTTCACAAAGCACTTGTAGAGTATGGTTGCTTTGAGGCTGTGTTTGATAAAGTCCCTTTGGACCTTCGAAAAGCCATATTTCTTGAAGTGGAAGAGCTGTTCAATCTCCCTTTACAAACCAAGCAACGAGTTGTATCTAGTAGGCCATACCATGGTTATGTTGGGCCTCTTCAACTCTATGAGAGCATGGGAATTGAGGATGCAGATGTTCATGAGAAAGTTGAAAGTTTAATCAAGATCTTATGGCCTCAAGGAAAACCAAGTCTTAGCAAAAATCTGCAATTCTTCATTGAGCAAGTGTCAAGGTTGGATCAGATGATCAGGAAGTTGATTTTGGAGAGTTTAGGTGTTGAAAAATATTTGGACGAGCACATGAACTCAACCAATTACCTTGCACGGCTTATCAAGTACCAAGGCCCTCAAACTGATGAAGCAGAAGTTGGCATTACAGCACACACAGATAAGAACATATTGACAACACTGTGTCAAAATCAAATTGATGGTTTAGAGGTACAGACCAAAAGTGGAGAGTGGATCAAATGCAAGCCCTCGACACCAAATAGTTTCGTTGTTGTTACTGGGGACACACTTTATGCATGGACAAATGGGAGGGTTCATACGCCCATTCACCGAGTGATGATGAGTGGAAACGAGACAAGGTTCTCTATTGGACTGTTCACAGTTCCAAAAACAGGGTTCATAATAAAGGCCCCAGATGAGCTTGTGACAGAGGAGTACCCTTTGCTTTTTAAGCCCTTTGTCCAGAGTGAGTTCATGAAGTTTGTTTACTCTTCTGAGGGTACCAAAGATGCTCTGAAGGTTTATTGTGGAGTCTGA 933 0.4212 MGSETEVKLPIIDFSIVDLESNVAEWESVKSQVHKALVEYGCFEAVFDKVPLDLRKAIFLEVEELFNLPLQTKQRVVSSRPYHGYVGPLQLYESMGIEDADVHEKVESLIKILWPQGKPSLSKNLQFFIEQVSRLDQMIRKLILESLGVEKYLDEHMNSTNYLARLIKYQGPQTDEAEVGITAHTDKNILTTLCQNQIDGLEVQTKSGEWIKCKPSTPNSFVVVTGDTLYAWTNGRVHTPIHRVMMSGNETRFSIGLFTVPKTGFIIKAPDELVTEEYPLLFKPFVQSEFMKFVYSSEGTKDALKVYCGV 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02553 310 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 160 261 IPR005123 -
Pumo5g02553 310 SUPERFAMILY Clavaminate synthase-like 7 297 - -
Pumo5g02553 310 Gene3D - 1 299 IPR027443 -
Pumo5g02553 310 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 292 - -
Pumo5g02553 310 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 2 299 - -
Pumo5g02553 310 Pfam 2OG-Fe(II) oxygenase superfamily 156 259 IPR044861 -
Pumo5g02553 310 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 90 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02553 Pumo-Chr5 70265326 70266876 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02553 3 290 Glycosyltransferase AT5G59530 23.856 3.07e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02553 - - gmx:100817152 567.77