Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02552 ATGGGATCCCAAACACTGTCTCAACTTCATGTTGTGGACTTCACCGATGAAAACATGAAGCCTGGCACCGATGCATGGCTCTCAGCCTGCAGTGTTGTGAGGACTGCACTTGAGGACAACGGTTTCTTCGTGGCACGCTATGATAAAATTGGCAAAGAGCTTTGCGACTCTATTGTGTTTGCAATGGAAGAGTTGTTCAGTCTCCCAGTGGAGACAAAGGCACAAAAGACCAGTGACAAACTTTTCCATGGCTACTTAGGACAAGTCTCGTGGCTTCCCTTGTATGAATCTGTGGGCATTGATGATCCGTTCACTATACAAGGATGCCAAAAATTCGCCCAAATAATGTGGCCAGAGGGGAATCATCGTTTCTGTGAAAGCATCAATGAGTATGCAAAGCTGTTGGGAGAATTAGACCGTATGGCAAAGAGAATGGTGTTTGAGAGCTATGGTGTGGACATGCAACGATGTGATTCTCTCATAGAATCAAGCGATTATCTACTTCGATGCATGAATTATAGGACACCCCAGATGGATGAAAATGATCAGGGACTGCAACCTCACTCGGACTTGACCATCACATCCATAGTGCATCAGCTGAATAATTTGAATGGCTTGGAAATCAAACTGAAGGATGGAGAATGGAAAGGAATTGATGCCTCACCCTCCTTCTTTGTGGTTATGGCCGGTGACGCATTCAATGTGTGGAGTAATGGCAGGATACGGCCATGTGAACACAGAGTTACAATGAATGCAAAGAAAACCAGATACTCTATGGGACTGTTTTCTTTTGGTGGTAATAAGATTATGCGTATACCAGAGGAGCTAGTTAATGAGCAACATCCCTTGCGTTATAAACCACTATTCGACCATTATGAATACCTTCGTTTCTATGACAAAGAGAAAATCAAAGAGCCCTATTCTCGAATCCAAGCCTACTGTGGAATCTCAAGCCCACAGTAG 963 0.4403 MGSQTLSQLHVVDFTDENMKPGTDAWLSACSVVRTALEDNGFFVARYDKIGKELCDSIVFAMEELFSLPVETKAQKTSDKLFHGYLGQVSWLPLYESVGIDDPFTIQGCQKFAQIMWPEGNHRFCESINEYAKLLGELDRMAKRMVFESYGVDMQRCDSLIESSDYLLRCMNYRTPQMDENDQGLQPHSDLTITSIVHQLNNLNGLEIKLKDGEWKGIDASPSFFVVMAGDAFNVWSNGRIRPCEHRVTMNAKKTRYSMGLFSFGGNKIMRIPEELVNEQHPLRYKPLFDHYEYLRFYDKEKIKEPYSRIQAYCGISSPQ 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02552 320 SUPERFAMILY Clavaminate synthase-like 7 302 - -
Pumo5g02552 320 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 2 303 - -
Pumo5g02552 320 Pfam non-haem dioxygenase in morphine synthesis N-terminal 24 85 IPR026992 -
Pumo5g02552 320 Gene3D - 7 317 IPR027443 -
Pumo5g02552 320 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 10 296 - -
Pumo5g02552 320 Pfam 2OG-Fe(II) oxygenase superfamily 171 263 IPR044861 -
Pumo5g02552 320 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 163 265 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02552 Pumo-Chr5 70258763 70260997 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02552 118 286 Glycosyltransferase AT5G59530 27.011 4.94e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02552 - - gmx:100775440 614.764