Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02546 ATGGCTCTAATCGCTGCCAGGATTCTCGGCTCCAATTCGAGACCCGCGGTCGCGCTCCGCCGCTGGCGGTGGTCGGCTTACTCCTCCGCCTCCGCGGCGGTGGCGGAGCCGGAGACCACGGAGGTGAAGGACTACGCCGATTACCGGCGCTCCCTGTACGGACAGATCACGCACAAGGCGCTCCTTGTCGACGCCGTTGGCACGCTCGTCCTCCCTTCGCAGCCCATGGCCCAGATATATAGAAAGATTGGGGAGAAGTATGGAGTGGAGTACTCGGAGGATGAGATACTCTTCAGATATAGAAGAGCTTATGGTCAGCCTTGGGGTAAATCTCGTCTCAGATATGTTAATGATGGTAGGCCTTTTTGGCAATACATAGTTAGTTATTCTACTGGCTGTTCAGATCCTCAATACTTTGAAGAACTTTATAACTATTATATGACAGACAAGGCATGGCACCTCAATGATCCTGGCGCAGAAGAAGTATTCAGAGCTCTTAGAAAATCAGGTGTGAAATTAGCTGTTGTGTCAAATTTTGACACTAGATTAAGACCTCTCCTGCGGGCATTAAATTGTGACAATTGGTTTGATGCAGTAGCAGTGTCAGCTGAGGTTGCAGCGGAGAAACCAAATCCAACTATATTTCTCAAAGCATGTGAATTATTGGATGTAAAACCTGAGGATGCTGTTCATGTTGGGGATGACCGCAGAAATGATATATGGGGTGCCAGGGATGCAGGCTGTGATGCTTGGCTTTGGGGAAGCGATGTTCACTCCTTTAAGGAGGTCTATGGCTTGTGGCATAACAGCATTTGCTTCTTCAATAATGGGAGCCTCTCTTAA 843 0.4899 MALIAARILGSNSRPAVALRRWRWSAYSSASAAVAEPETTEVKDYADYRRSLYGQITHKALLVDAVGTLVLPSQPMAQIYRKIGEKYGVEYSEDEILFRYRRAYGQPWGKSRLRYVNDGRPFWQYIVSYSTGCSDPQYFEELYNYYMTDKAWHLNDPGAEEVFRALRKSGVKLAVVSNFDTRLRPLLRALNCDNWFDAVAVSAEVAAEKPNPTIFLKACELLDVKPEDAVHVGDDRRNDIWGARDAGCDAWLWGSDVHSFKEVYGLWHNSICFFNNGSLS 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02546 280 NCBIfam HAD-IA family hydrolase 148 249 IPR006439 -
Pumo5g02546 280 PANTHER - 24 264 - -
Pumo5g02546 280 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 58 69 IPR006439 -
Pumo5g02546 280 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 166 179 IPR006439 -
Pumo5g02546 280 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 196 212 IPR006439 -
Pumo5g02546 280 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 214 234 IPR006439 -
Pumo5g02546 280 SUPERFAMILY HAD-like 59 263 IPR036412 -
Pumo5g02546 280 Pfam Haloacid dehalogenase-like hydrolase 67 250 IPR041492 -
Pumo5g02546 280 Gene3D - 63 254 IPR023214 -
Pumo5g02546 280 Gene3D - 74 147 IPR044924 -
Pumo5g02546 280 NCBIfam HAD hydrolase, REG-2-like, family IA 59 252 IPR011949 -
Pumo5g02546 280 CDD HAD_dREG-2_like 159 256 - -
Pumo5g02546 280 NCBIfam HAD-IA family hydrolase 167 247 IPR006439 -
Pumo5g02546 280 SFLD Haloacid Dehalogenase 59 253 - -
Pumo5g02546 280 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 59 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02546 Pumo-Chr5 70094224 70099518 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02546 - - gmx:100789672 496.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02546 5 70094224 70099518 Pumo5g02546 5 70094224 70099518 ECH