Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02545 ATGAGGCCGCAACTGCACTTCGCTGCGGCTGTCGCGGCGGTTGTCGTGACAGCTTGGATTGCGCACATGCGCAGCGGCGTTGGGCAATCGGAGGACAAGGTGAAGGGTTGGCAGTACGAGGCTGTTCCGATTGACGGCGCCGTCGGACCGGAGAGCTTCGCCTTCGATCCTCGCGGCGAAGGTCCTTACACCGGCGTTTCCGACGGTCGAATCATCAAATGGCACCGCACTCAGAATCGTTGGCTCAACTTTTCCGTTACTTCTTCTTCACACAGGGATGAAGAGTGTGGAGGACCATGTGATCAGCATCCCAAGAAAGAGCACGTGTGTGGGCGTCCACTTGGGTTGTGCTTTAGCATAATATCCAATGATCTTTACATTGCTGATTCTTACAATGGCTTAGTTGTTGTTGGTCCCAATGGTGGCACCACTAGAAGACTCATATCAACTATAGAAGGTGAACCCTTGGCTTTTACTAACGGTTTGGATGTTGATCAACGAACTGGAGCAGTGTACTTCACCAGCAGTAGTTCAAAATATCAAAGGAGGAATTACATCTCTCTGATCCTAAGCAGAGATAAAACGGGGAAGCTGTTGAAATATGAGCCACAAAGTGAACAAGTTAGCGTTCTTCTAAACAATCTCTCGTTTGCAAATGGAGTAGCATTAAGCAAAGATGGTGACTATATTCTAATAATAGAGACCACAACCTGTAGAGTACTAAGGTATTGGCTAGAAACCCCAAAAGCTGGGACCTTGGAAGTCTTTGCTGATCTACCAGGTTTCCCAGACAACATCAAACGGAGTCCAAGAGGGGGGTTTTGGGTGGGAATTTACTCAAGAAGAGAAAAATTTATCCAATGGATTCTATCATATCCTTGGATTGGAAAAGTTTTGCTTAGGCTTCCTTTGGACATCACAAAAGCTTATTCATATTTGGCCAAGCTAAAAGGGAGTACTGGATTGGCAATTAGGCTAAGTGAGCAGGGTGATATATTAGAAATTATTGAAGAGAAAAATGGGAGCAGAAGGAGGTCTATTAGTGAAGTGGAGGAAAGAGATGGGATATTATGGGTGGGATCCATAGATACACCTTTTGTTGGTAAGTATAATATTCATGTTGCAGAAGAACAAGTCAAACGGATTTGA 1149 0.4526 MRPQLHFAAAVAAVVVTAWIAHMRSGVGQSEDKVKGWQYEAVPIDGAVGPESFAFDPRGEGPYTGVSDGRIIKWHRTQNRWLNFSVTSSSHRDEECGGPCDQHPKKEHVCGRPLGLCFSIISNDLYIADSYNGLVVVGPNGGTTRRLISTIEGEPLAFTNGLDVDQRTGAVYFTSSSSKYQRRNYISLILSRDKTGKLLKYEPQSEQVSVLLNNLSFANGVALSKDGDYILIIETTTCRVLRYWLETPKAGTLEVFADLPGFPDNIKRSPRGGFWVGIYSRREKFIQWILSYPWIGKVLLRLPLDITKAYSYLAKLKGSTGLAIRLSEQGDILEIIEEKNGSRRRSISEVEERDGILWVGSIDTPFVGKYNIHVAEEQVKRI 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02545 382 Pfam Strictosidine synthase 160 247 IPR018119 GO:0009058|GO:0016844
Pumo5g02545 382 SUPERFAMILY Calcium-dependent phosphotriesterase 29 374 - -
Pumo5g02545 382 PANTHER STRICTOSIDINE SYNTHASE-RELATED 26 363 - -
Pumo5g02545 382 Gene3D - 38 380 IPR011042 -
Pumo5g02545 382 FunFam Protein STRICTOSIDINE SYNTHASE-LIKE 13 35 373 - -
Pumo5g02545 382 Pfam Strictosidine synthase-like, N-terminal 40 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02545 Pumo-Chr5 70064053 70072476 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02545 - - gmx:100789150 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02545 5 70064053 70072476 Pumo5g02545 5 70064053 70072476 ECH