Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02544 ATGGCCACTATGAACTCAGGGCTGGTTGCAGGTGCAACCTTGCTTGCACTCTTGGCTATCACCTTCTCCTTTTTGAACCCTCAAACCTTGTTTTCTCCGCCTCATGTTCCGGGATCCAAGGACCACCTCCACGCTGCTCGGTTACTCCATGTCACCGGAGCCGTCGGGCCCGAGAGTCTTGTCTTCGACGCTGACGGTGGAGGGCCCTACACCGGCGTCGCCGATGGCCGGATTCTCAAGTGGGAAGGGGAAGAGCGAGGTTGGACTGAATTTGCTGTCACCAGTTCCAATAGGTCGGACTGTGTACGTCCGTTTGCACCCGAGTTGGAGCACATTTGTGGGAGGCCATTAGGACTAAAATTTGATAAGAAAAGTGGAGATCTGTACATTGCTGATGCCTACCTGGGCCTAAAAGTTGTGGGATCTACAGGGGGTTTGGCCACTGAAGTGGTAACAGAAGTTGAAGGTCAGCCCTTGCGCTTCACCAATGACATGGACATCAGTGAAGATGAAGATGCAATCTACTTCACTGATTCAAGCACAATCTTCCACAGAAGGCAATTTATGCTTGTACTCCTTAGTGGAGACAAGACCGGCCGGTTTATGAAATATGACAAGTCAACAAAAGAAGTGACGGTCCTACTACGCGACCTTGCTTTTCCCAATGGTGTTGCTTTAAGCAAAGATGGCTCATTTGTTCTGATAGCAGAAACCACTACTTGCCGGATCTTGCAGCTTTGGCTTCGTGGACCCAAGGCTGGCCAAGTGGATACATTTGCAGTTCTGCCTGGTTTTCCAGACAATGTTAGAAGAAATTCAGAAGGACATTTCTGGGTAGCTCTGCACGCAAAGGGAAGTCGTTTTGCGAAGTGGGTTTCTTCTAATCCGTGGGCGGGAAAGGCAATGCTAAAGATTGGATTTAACTTCAAGCAGTTGCACTCATCATTTGCAGGGTGGAAGCCTCATGCTGCTGCTGTAAAGCTGAGTGATGAAGGAGAGATATTGGAAGTCTTGGAAGATTGTGAAGGGAAGACCTTAAAGTTCATCAGTGAAGTGGAAGAGAAAGATGGGAAGCTTTGGATTGCATCAGTGTTGATGCCCTTCATTGGCATTTATGGTTTGTAA 1125 0.4853 MATMNSGLVAGATLLALLAITFSFLNPQTLFSPPHVPGSKDHLHAARLLHVTGAVGPESLVFDADGGGPYTGVADGRILKWEGEERGWTEFAVTSSNRSDCVRPFAPELEHICGRPLGLKFDKKSGDLYIADAYLGLKVVGSTGGLATEVVTEVEGQPLRFTNDMDISEDEDAIYFTDSSTIFHRRQFMLVLLSGDKTGRFMKYDKSTKEVTVLLRDLAFPNGVALSKDGSFVLIAETTTCRILQLWLRGPKAGQVDTFAVLPGFPDNVRRNSEGHFWVALHAKGSRFAKWVSSNPWAGKAMLKIGFNFKQLHSSFAGWKPHAAAVKLSDEGEILEVLEDCEGKTLKFISEVEEKDGKLWIASVLMPFIGIYGL 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02544 374 Gene3D - 40 373 IPR011042 -
Pumo5g02544 374 FunFam Protein STRICTOSIDINE SYNTHASE-LIKE 13 41 374 - -
Pumo5g02544 374 SUPERFAMILY Calcium-dependent phosphotriesterase 23 369 - -
Pumo5g02544 374 Pfam Strictosidine synthase 163 250 IPR018119 GO:0009058|GO:0016844
Pumo5g02544 374 PANTHER STRICTOSIDINE SYNTHASE-RELATED 16 367 - -
Pumo5g02544 374 Pfam Strictosidine synthase-like, N-terminal 41 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02544 Pumo-Chr5 70053280 70056669 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02544 - - gmx:100815025 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02544 5 70053280 70056669 Pumo5g02544 5 70053280 70056669 ECH