Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02542 ATGTCAAGTGGATCCGTGAGACGGGTTTCCCGTCAAGATATTCAGCTGGTGCAAAATCTCATAGAACGATGTCTACAACTGTATATGAGCCAGAAAGAAGTTGTGGAAACACTACTAGCTCAAGCAAAAATAGAGCCTGGTTTCACTGAACTAGTTTGGCAAAAGCTTGAAGAAGAAAATGAAGAGTTCTTCAAGGCTTATTATGCAAGATTGGTTTTGAAGCAGCAAATATTGCAATTCAACAAATTGCTGGATCAACAAGTGCAATTAATGCAGTTACACTCAAGTGCTGTTGCATCACTACCTACATCTAATGGGTCACATATCCCTGCAGTTTCATCACTACCTAACTCTAATGGATCACATATCCCTGCAATACCTGAGAATCCAGCATGCTACACTGCAGACCGAACCCAAACAAGTTTGAAACCAGAAACTATGCAACATCCTGTTGATTCCAGATTATCTAATGTGTTTAATAATGGAGGGTCATCACTGCATCCAAGTATGCATTCTGCAGTTGATATCTCTTCTCATGGCAATAGGATTAATGGTCCTCCGAGCATGCTTTCTGCTCAAAGTGCAAACATGGGTCTGATACAAGGAATCAATGGTGGTGGGATGATCAAATCTGAACCTGGATATTCTGGTTGTTCTCCTTACATGTTTGGTACTGATGGAAATGTCCTGGAGCCACGCCCAACTATTGGTGGTGCTTCAGTTACGTCATTCACTAATGTTGATTCCAACTCACATTCTCTGAATGAGGCAGTCCTAGATCCAGACACTTCTTCATTTGGATTTCTGGGGCAGATTCCCAGAAATTTTAGCCTTTCAGATCTGACTGCTGATTTTTCTCAGAGTTCCGATATACTGGAGACCTATTCTAGGTCACCCTTCCTAGCTACGGATAACGAGAACTTCCTTGACAGAGGAGAACAAGACAATAATAGGCTGGACTCCATATCAGAAGGCTTGAGTTATGAAGACTTTGGGAGTGAGTGA 1005 0.4189 MSSGSVRRVSRQDIQLVQNLIERCLQLYMSQKEVVETLLAQAKIEPGFTELVWQKLEEENEEFFKAYYARLVLKQQILQFNKLLDQQVQLMQLHSSAVASLPTSNGSHIPAVSSLPNSNGSHIPAIPENPACYTADRTQTSLKPETMQHPVDSRLSNVFNNGGSSLHPSMHSAVDISSHGNRINGPPSMLSAQSANMGLIQGINGGGMIKSEPGYSGCSPYMFGTDGNVLEPRPTIGGASVTSFTNVDSNSHSLNEAVLDPDTSSFGFLGQIPRNFSLSDLTADFSQSSDILETYSRSPFLATDNENFLDRGEQDNNRLDSISEGLSYEDFGSE 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02542 334 PANTHER OS02G0137100 PROTEIN 11 291 IPR006476 -
Pumo5g02542 334 Pfam Plant protein 1589 of unknown function (A_thal_3526) 17 69 IPR006476 -
Pumo5g02542 334 NCBIfam TIGR01589 domain 14 69 IPR006476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02542 Pumo-Chr5 69986014 69992393 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02542 - - gmx:100787548 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02542 5 69986014 69992393 Pumo5g02542 5 69986014 69992393 ECH