Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02520 ATGGCAATCCTTAAGATTACCAAAAAGCACCATAAGCGTTTCAACAACCCTTTCCCTTCTTCAGTTTCAACCACCATCCCCTATGTCCAAGGTTCTCTCTTCTTCAATTCCAAAAGAGTTCCTTCGGATCAGACCTTCTCAATTGGCAGTGATTTTCAGCTTTCTTGGACCTCCAACAATGGAGGACACCTCTCAATTTCGCATCTTTCTCAACAAACCAGACCCATTTGGTCTACCATCCCAGGACAGGCTTTTGTCTCAGCTGCACTGGTTGACACAGAAGTTGAAGAAAGTAGAGGATCCTTTCTTGTCAAAGACAAAGATGTTCATTTGGTTTGCAATCACCAAACCATTGAGGATATTAGGGTGATTGAGAATATTGGGGTGATCAATAGTCAATTTGATCATCATTTGGAATGTGAAGTTGCAGATTCTCCTTCTGTGTCACAAGGGTTGGAAAAGAAAAGTGATGCACAAGAGATTCAGCTTCCTACTTTGATGATCACAGGAAGGCTTTTCAACATGACTAAGAAGAGTAAAAGGTTTCAAAAGCATGGCATTCAAGCAACTATGCAGTTTGAGGCAAAAGGGCCCTCTGTGTATGCAAGGTATTGGGTTTTGTTCAATCAGAAAACCAACCATGAGGTTGGGTTTCAAGTGAAGATTGAGAAACCCAGCTTCATCTCACGCAATCAGGTCTCTAAAAAAGATTCAGGAGTGTACCAGGGCTTTAAGAGGAGGCTGAGTAATGGGAAAAAGAGACTGGGTTGGTGTTGGTACCTTTCAAGGCCAAAAGGGTTTGTGCTAGTTTCTTCAGTGGAGGAAGAGATGGGAAACTTGAATATCCCAAAACCAGAAGAGTTCAATAGAGTGTGGTTGACATATGCAAGTGATGAGAATGAGAGGTTTTATGGTTTTGGTGAACAGTTTTCTCACATGAATTTCAAAGGCAAAAGGGTGCCCATCTTTGTTCAAGAACAAGGTATTGGCAGAGGAGACCAGCCTATTACCTTGGCTGCTAACTTGATCAGTTACAGGGCAGGAGGTGATTGGAGTACAACTTATGCTCCTTCTCCATTCTACATAACATCAAAAATGAGGTCTGTCTGCCTTGAAGGATATGATTATAGTGTCTTCGATCTTACTAGACTTGACAGAGTACAGATACAGATACATGGAAACTCGGTTGAAGGGCGCATATTGCATGGGAACTCACCTTGTGAACTGATTGAACGTTCCACAGAAAGCATTGGAAGGCTACCTGAGCTTCCAGAGTGGATAATATCAGGTGCTATAGTTGGAATGCAGGGTGGCACAGATGCTGTACGTCATATTTGGGATGAACTAAGGACATATGACGTTCCTGTCTCAGCATTTTGGTTGCAGGATTGGGTAGGACAGAGAGAAACATTGATTGGTTCGCAGCTCTGGTGGAATTGGGAAGTGGATGCGCAAAGGTATTGGGGATGGAAGGAACTTATCAAAGATCTTAGCTCTCAGAATATACAAGTTATGACGTATTGCAATCCCTGTCTAGCTCCGGTTGATGAGAAACAAAACAAAAGGAGAAACCTCTTTGAGGAGGCAAAACAGTTGGACATATTGGTGAAAGACAGCAATGGAAATCCATACATGGTTCCAAACACGGCTTTTGATGTAGGAATGCTGGATCTAACGCACCCAAAAACTGCAACTTGGTTCAAGCAGATTCTACGAGAAATGGTGGATGATGGAGTTAGAGGATGGATGGCTGATTTTGGTGAAGGCCTTCCTGTTGATGCTGTTCTATATTCAGGTGAAGATCCTATTTCAGCTCATAACAGATACCCAGAACTATGGGCCAAAATTAACAGAGAGCTTGTGGAAGAATGGAAAAGTGACTCCTCAGACAAGGTGAAGGAAGACCAAGAAGATGGCTTGGTTTTCTTCATGAGGGCTGGTTTTAGAGATAGCCCCAAGTGGGGGATGCTATTTTGGGAAGGAGACCAAATGGTCAGTTGGCAAACAAATGATGGAATAAAGAGTTCTGTTGTTGGCCTACTCAGCAGTGGAATTTCTGGCTATGCCTTTAATCACAGTGACATTGGAGGATACTGTACAGTAAACTTACCTATAGTTAAATATAGAAGAAGTGAAGAATTGCTTTTGCGATGGATGGAGCTAAATTCTTTTACCACAGTCTTCCGCACCCATGAAGGAAACAAGCCATCATGCAACAGCCAGTTTTACTCAAACCAGCAAACAATGTCACACTTTGCACGTTCTGCAAAAGTATACAAAGCATGGAAATTTTACCGAATTCAACTGGTGAAGGAAGCTGCACAGAAAGGATTGCCTGTATGCCGCCACCTATTTCTCCATTATCCTGATGATGAACGTGTGCATCATTTGACTTATCAGCAGTTCTTGGTTGGTTCTGAGTTACTAGTGGTGCCTGTCCTTGACAAAGGAAAGAAAAAAGTTAAAGCTTACTTTCCATTGGGAGAGAGTAGCAGTTGGCTCCATATCTGGACAGGAAAAGTATTTTCCAAACAAGGAAGTGAAGAAAGGATTGAAGCTCCAATAGGATATCCTGCAGTATTTGTTAAAGTTGGCTCCCTTGTTGGAGAAACCTTTTTGAATAATCTAAGAAGTTTAGGCATTCTTTAA 2649 0.4213 MAILKITKKHHKRFNNPFPSSVSTTIPYVQGSLFFNSKRVPSDQTFSIGSDFQLSWTSNNGGHLSISHLSQQTRPIWSTIPGQAFVSAALVDTEVEESRGSFLVKDKDVHLVCNHQTIEDIRVIENIGVINSQFDHHLECEVADSPSVSQGLEKKSDAQEIQLPTLMITGRLFNMTKKSKRFQKHGIQATMQFEAKGPSVYARYWVLFNQKTNHEVGFQVKIEKPSFISRNQVSKKDSGVYQGFKRRLSNGKKRLGWCWYLSRPKGFVLVSSVEEEMGNLNIPKPEEFNRVWLTYASDENERFYGFGEQFSHMNFKGKRVPIFVQEQGIGRGDQPITLAANLISYRAGGDWSTTYAPSPFYITSKMRSVCLEGYDYSVFDLTRLDRVQIQIHGNSVEGRILHGNSPCELIERSTESIGRLPELPEWIISGAIVGMQGGTDAVRHIWDELRTYDVPVSAFWLQDWVGQRETLIGSQLWWNWEVDAQRYWGWKELIKDLSSQNIQVMTYCNPCLAPVDEKQNKRRNLFEEAKQLDILVKDSNGNPYMVPNTAFDVGMLDLTHPKTATWFKQILREMVDDGVRGWMADFGEGLPVDAVLYSGEDPISAHNRYPELWAKINRELVEEWKSDSSDKVKEDQEDGLVFFMRAGFRDSPKWGMLFWEGDQMVSWQTNDGIKSSVVGLLSSGISGYAFNHSDIGGYCTVNLPIVKYRRSEELLLRWMELNSFTTVFRTHEGNKPSCNSQFYSNQQTMSHFARSAKVYKAWKFYRIQLVKEAAQKGLPVCRHLFLHYPDDERVHHLTYQQFLVGSELLVVPVLDKGKKKVKAYFPLGESSSWLHIWTGKVFSKQGSEERIEAPIGYPAVFVKVGSLVGETFLNNLRSLGIL 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02520 882 PANTHER SULFOQUINOVOSIDASE 1 881 - -
Pumo5g02520 882 CDD GH31_N 288 418 - -
Pumo5g02520 882 SUPERFAMILY Galactose mutarotase-like 259 406 IPR011013 GO:0003824|GO:0005975|GO:0030246
Pumo5g02520 882 Coils Coil 515 535 - -
Pumo5g02520 882 CDD GH31_glucosidase_YihQ 418 756 IPR044112 -
Pumo5g02520 882 SUPERFAMILY (Trans)glycosidases 409 777 IPR017853 -
Pumo5g02520 882 Gene3D Glycosidases 405 810 - -
Pumo5g02520 882 Pfam Glycosyl hydrolases family 31 401 867 IPR000322 GO:0004553|GO:0005975
Pumo5g02520 882 SUPERFAMILY Glycosyl hydrolase domain 779 863 - -
Pumo5g02520 882 Gene3D - 811 863 IPR013780 -
Pumo5g02520 882 Gene3D glycosyl hydrolase (family 31) 247 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02520 Pumo-Chr5 69608998 69614679 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02520 299 854 Glycoside Hydrolase AT3G45940 23.986 2.35e-22 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02520 - - gmx:100779005 1734.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02520 5 69608998 69614679 Pumo5g02520 5 69608998 69614679 ECH