Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02517 ATGGACAATATTGAACCCGGTGGCAATATTTCTCTCTTGAATTTGCCAGAACCCATATTGGATCACATTCTAAAGCGCCTTTCACCAATGGAACTCGTTAGGATGTCTGAAGTGTGTACTCGTTTAAGGGATAGATGTCGAAGTGATCCTTTGTGGGAACTCCACATGAAGCTGAAATGGGGTGGAGTCATTGGTGATGTTGCTTACAAGGAGTGGCAGTGGCATATCACAACAGCAAAGGAGAAAGGAAACAAAGTGAATCAACACAACAATCAGAATGGATCACTGGGGTCTTTCAGTGGTACTTGGCCTATGTTATACCTCAGGTCATATCTACAAGATTGTAGCCATCTTAATAGCTCATTGGCCAATAGCTTTATGATGACCTTGTATTTCTCTCTAGAGAATGGCAAGTTCTGGTTTCCAGCTCAAATCTACAAGGAAATATTCGTTCAGGACGCCATAGTTAGATATGATTCCAAATCTGATGACTTTATTGAAGTAAGACAACAAAATGGGATTTGGCAAGTAATGGTAATAAGGAACAACGTCCAATGGGATAACCTGAGAGCTCCCCCAGTTGATACCCCTCCATGGGATCGATACGTCTCTGATTGTTTACAAGACTTAAAACCAGGGGATCATGTTGAGATCCAATGGAAGTCGAGTAGATATACTCCTTATGAGACATTGATCGTGGAGTTCAAGGAACACCTTCATGGATCTATGACGAGACGTGTAAAGCTACTCAGAAATGGGGAACAATGTGAAGTACCAACCGGCAGTGGCAGATGCTTTGGAGGAATTAGAAAGCTTCACAGTGACCAGGAGATCCAAAGATGGGAGAAGTTCGTGCTGCCACTTCCTGTATTAGTTAGACCCACACAATACAACTTTGCAGGAATCTGA 909 0.4257 MDNIEPGGNISLLNLPEPILDHILKRLSPMELVRMSEVCTRLRDRCRSDPLWELHMKLKWGGVIGDVAYKEWQWHITTAKEKGNKVNQHNNQNGSLGSFSGTWPMLYLRSYLQDCSHLNSSLANSFMMTLYFSLENGKFWFPAQIYKEIFVQDAIVRYDSKSDDFIEVRQQNGIWQVMVIRNNVQWDNLRAPPVDTPPWDRYVSDCLQDLKPGDHVEIQWKSSRYTPYETLIVEFKEHLHGSMTRRVKLLRNGEQCEVPTGSGRCFGGIRKLHSDQEIQRWEKFVLPLPVLVRPTQYNFAGI 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02517 302 Gene3D - 8 117 - -
Pumo5g02517 302 PANTHER ESTS AU081301(E20138) 4 229 - -
Pumo5g02517 302 Pfam F-box domain 12 53 IPR001810 GO:0005515
Pumo5g02517 302 SUPERFAMILY F-box domain 7 67 IPR036047 GO:0005515
Pumo5g02517 302 ProSiteProfiles F-box domain profile. 9 55 IPR001810 GO:0005515
Pumo5g02517 302 SMART fbox_2 15 55 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02517 Pumo-Chr5 69589489 69591629 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02517 - - gmx:100797585 424.476