Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02515 ATGGACAATATTGAACGTAGTGTCAATATTTCTCTCTTGAATTTGCCAGAACCCATATTGGATTACATTCTAAAGCTCCTTTCACCAATGGAACTCGTTAGGATGTTTGAAGTGTGTACTTTTTTAAGGGATAGATGCCGTAGTGATCCTCTGTGGGAAGTCCACATAAAGCAGAAATGGGGTGGAATCATTGGTGATGTTGCTTACAAGGAGTGGCAGTGGCATATCACAACAGCAAAGGAGAAAGGAATTAACCAATTGAATCAGAATGGATCATTGGGGCCTTTCAGTGGTACTTGGCCTATGTTGTACCTCAGGTCATATCTAGAAGATTGTAGCTTTCTTAATACCTCATTGGCAAATAGCTTTATGATGTCTTTGTTTTTCTCTCTAGAGAATGGCCAGTTCTGGTTCCCAGCTCAAACCTTCAGGCAGGGATTATTTGCTCGTGACGCCTTAGTTAGATATGATTCCAAAACTGATAACTTTCAAGCAAGACAACAAAATGGGGGTTGGCACGTAATGGGGGCAAACATCCAATGGGATAACCTGAGAGCTCCCCCTCTTGATAACCCTCCATGGGTTCGATACGTGTCTGATTGTTTACAAGACTTAAAACCAGGGGATCATATTGAGATCCAATGGAAGTCAAGTAGAGATATTCCTTATGATTGGTGGTATGCTGTTATTGGTCACATGGAATCGTGTAATGAAAATGAGAACGACTGCTGCTGCCGTTCCTCTGAGACATTGATCGTGGAGTTCAAGCAATACGCTCTTGGATCTAGAATGAGACGAGTAAAGCTACTCAGAAATGGTGAACAATATGAAGAACCAACCGGATGCTATGGAGGAATTAGAAAGCTTTACAGTGAGGAGGAGATCCAAAGATGGGAGAAGCTCTTGCCACCGCATCAAACTCCTGTATATATAACTTGA 939 0.4196 MDNIERSVNISLLNLPEPILDYILKLLSPMELVRMFEVCTFLRDRCRSDPLWEVHIKQKWGGIIGDVAYKEWQWHITTAKEKGINQLNQNGSLGPFSGTWPMLYLRSYLEDCSFLNTSLANSFMMSLFFSLENGQFWFPAQTFRQGLFARDALVRYDSKTDNFQARQQNGGWHVMGANIQWDNLRAPPLDNPPWVRYVSDCLQDLKPGDHIEIQWKSSRDIPYDWWYAVIGHMESCNENENDCCCRSSETLIVEFKQYALGSRMRRVKLLRNGEQYEEPTGCYGGIRKLYSEEEIQRWEKLLPPHQTPVYIT 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02515 312 PANTHER ESTS AU081301(E20138) 3 305 - -
Pumo5g02515 312 Gene3D - 2 114 - -
Pumo5g02515 312 ProSiteProfiles F-box domain profile. 9 55 IPR001810 GO:0005515
Pumo5g02515 312 Pfam F-box domain 12 52 IPR001810 GO:0005515
Pumo5g02515 312 SUPERFAMILY F-box domain 10 63 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02515 Pumo-Chr5 69563398 69566022 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02515 - - gmx:100797585 518.85