Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02504 ATGACTATGCATAAGATTGTGCAAAGGGGTCGTCGATTCTTTAATCCTCCACCGCAACTTATTACTGGTTTCTCAGGTTCTGCTGCTTCTCATGCTTTTCCCTCTTGTGGGGCTGAATCTCTTCATGTTCGGGAAATTACAAACACAAGAGAAGTTAGGAATGAATTTGACAAATACCATGTAAAAGGTTTATCTCGATACCTGAACTGGACTTCAAGGCCAAATGACAACAGTCAAGCATCCTGCTATGTGGTAAATCGTCATTTTGCATCTGATCACAATGATATATGCTCAAAGGAGTTCTCAAGTAAGCTTCTTCAAAGTATTCCAGATTATGTAAAGATAGTGGAGGTTGGTGCAAGGGATGGATTGCAAAATGAGAAGGCTATTATTCCTACTGATGTAAAAGTTGAGTTAATAAAACTACTAGTTTCTTCTGGGTTGTCTGTTGTTGAGGCAACTAGTTTTGTCTCGCCAAAATGGGTACCCCAGTTGGCAGATGCAAAGGATGTATTGGCAGCAATTCAAAATGTTGAAGGTGCTAGGTTTCCTGTCTTGACTCCAAACCTTAAAGGTTTTGAGGCAGCTGTTGCTGCTGGAGCTAAAGAAGTGGCTGTTTTTCCTGCAGCTTCTGAATCATTCTCAAAAGCAAATCTGAATTCTGGCATTGAGGATAATCTTGCTCGTTGCCGTGATATTGCTTTAGCTGCTAGAAGCCTCTCAATCCCAGTTCGCGGATATATATCATGTGTTGTGGGATGTCCTCTGGAAGGAAATATTGCTCCAGCAAAAGTAGCATATGTGGCAAAATCGCTGTATGAGATGGGTTGCTCAGAGATTTCACTGGGGGATACAATTGGTGTTGGCACACCTGGTTCTGTCATTCCGATGCTTGAAGCTGTTCTTGGTGTTGTTCCAATTGACATGCTAGCTGTCCACTTTCACGATACTTATGGTCAGGCACTTTCAAATATTTTAATTTCACTTCAGATGGGGATCAGCACAGTGGATTCATCTGTTTCTGGCCTTGGAGGTTGCCCATATGCCAAGGGTGCAACTGGGAATGTTGCCACTGAGGATGTCGTTTACATGCTGAATGGACTTGGGGTGAAAACAAATGTGGACCTTGGAAAGCTTATACTTGCTGGGGATTTCATCTGCAAGCATTTAGGACGTGCATCTGGTTCAAAAGCAGCAACTGCTTTGTGTAAAGTTACAAGTCATGCTTCCAAACTATGA 1239 0.4237 MTMHKIVQRGRRFFNPPPQLITGFSGSAASHAFPSCGAESLHVREITNTREVRNEFDKYHVKGLSRYLNWTSRPNDNSQASCYVVNRHFASDHNDICSKEFSSKLLQSIPDYVKIVEVGARDGLQNEKAIIPTDVKVELIKLLVSSGLSVVEATSFVSPKWVPQLADAKDVLAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAVFPAASESFSKANLNSGIEDNLARCRDIALAARSLSIPVRGYISCVVGCPLEGNIAPAKVAYVAKSLYEMGCSEISLGDTIGVGTPGSVIPMLEAVLGVVPIDMLAVHFHDTYGQALSNILISLQMGISTVDSSVSGLGGCPYAKGATGNVATEDVVYMLNGLGVKTNVDLGKLILAGDFICKHLGRASGSKAATALCKVTSHASKL 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02504 412 Pfam HMGL-like 113 385 IPR000891 GO:0003824
Pumo5g02504 412 CDD DRE_TIM_HMGL 115 388 - -
Pumo5g02504 412 Gene3D Aldolase class I 106 405 IPR013785 -
Pumo5g02504 412 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 94 406 IPR043594 GO:0016833
Pumo5g02504 412 ProSiteProfiles Pyruvate carboxyltransferase domain. 113 380 IPR000891 GO:0003824
Pumo5g02504 412 SUPERFAMILY Aldolase 108 404 - -
Pumo5g02504 412 FunFam Hydroxymethylglutaryl-CoA lyase, mitochondrial 107 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02504 Pumo-Chr5 69309091 69316098 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02504 K01640 - gmx:100801507 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02504 5 69309091 69316098 Pumo5g02504 5 69309091 69316098 ECH