Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02486 ATGGATTCGCTGTGTCTTTCCAACGATTCAGTTTCTGGATTCAAAGACAAGGAGTCAATGGTTGACCCCTTTTTGGTCGAGGCTCTCCAGAACCCTCGTCACCGCCTCACCATTTTGCGGATGGAGCTGGACATCCAGAAGTTTATGAATAATGCTGATCAGCAGCATTTTGAGTTTCAACATTTCCCTTCTTCCTATCTCCGACTGGCTGCACACCGTGTTGCTCAACACTACAACATGCAAACAGTGGTTCAAGATAATGGCTTAGATGGCCAGGGAAGTAAAATTCTGGTGAGGAAGTTACCAGAAAGCAAGTATCCTGTGGTTCGATTATCTGAAATACCTGCTAGGCAGTTTGAAAATGATAAATCTGAGCAGAAAAAAATTGTTATTAGACCTAGGCCTAATAAAAACAGTTTGAATGAAGCCAACGGAGTTGGGATAAAAGGAAATCCTGTAAGAAGTGTGGAAGAAAGGAAGGAGGAATATGACCGGGCACGGGCACGTATCTTTAGTAGCTCTAGAAGCTCTGACTCAGGTGATATCTCATCCATGGTTCCAATGGATGGGAGAAATTCTTCTACTAGCAAGGATGAGAATGAAACTAGCAAGAACCCCATGGCCGATTCAGAAAGATATCGAGTTGCCATACTCAGAGATAGGGAAAAGGATCGTAGTGATCCAGATTATGACCGTAGTTATGGAAGGTATGCTAGGAGTATCCCAACCTCTGCTGTTAACTTGGTGCCATTTAACTTGCAAAAAGCTCAACCTTCATTTGCTCAATATGATGCTACATTTAATCAGTTGGGTCAGATGTCACAAACTCGGGCCTCACTTGGCTACGTACCTCCTTCAACCCCGATAATGAGTCCTTTTTGCACCACAGGATTGAATCAGACATCTAGGGATGGTGCTTACCCACAATGGCCTAGTGCTGCTATGATGTATGCACATTCATACGACCAATTTAGGCATGCTGTTTTCCAGGCTCCATTTGGTCAACAGCCGTTGAGCCTTGACTATTCACAATACTATTAG 1041 0.4371 MDSLCLSNDSVSGFKDKESMVDPFLVEALQNPRHRLTILRMELDIQKFMNNADQQHFEFQHFPSSYLRLAAHRVAQHYNMQTVVQDNGLDGQGSKILVRKLPESKYPVVRLSEIPARQFENDKSEQKKIVIRPRPNKNSLNEANGVGIKGNPVRSVEERKEEYDRARARIFSSSRSSDSGDISSMVPMDGRNSSTSKDENETSKNPMADSERYRVAILRDREKDRSDPDYDRSYGRYARSIPTSAVNLVPFNLQKAQPSFAQYDATFNQLGQMSQTRASLGYVPPSTPIMSPFCTTGLNQTSRDGAYPQWPSAAMMYAHSYDQFRHAVFQAPFGQQPLSLDYSQYY 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02486 346 SMART R3H_4 19 101 IPR001374 GO:0003676
Pumo5g02486 346 ProSiteProfiles R3H domain profile. 35 102 IPR001374 GO:0003676
Pumo5g02486 346 MobiDBLite consensus disorder prediction 153 171 - -
Pumo5g02486 346 Pfam R3H domain 37 88 IPR001374 GO:0003676
Pumo5g02486 346 SUPERFAMILY R3H domain 8 123 IPR036867 GO:0003676
Pumo5g02486 346 CDD R3H_encore_like 34 100 - -
Pumo5g02486 346 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 18 333 - -
Pumo5g02486 346 Pfam SUZ domain 125 174 IPR024771 -
Pumo5g02486 346 MobiDBLite consensus disorder prediction 172 193 - -
Pumo5g02486 346 ProSiteProfiles SUZ domain profile. 105 175 IPR024771 -
Pumo5g02486 346 MobiDBLite consensus disorder prediction 119 234 - -
Pumo5g02486 346 MobiDBLite consensus disorder prediction 194 234 - -
Pumo5g02486 346 Gene3D - 11 135 IPR036867 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02486 Pumo-Chr5 68866016 68870072 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02486 - - gmx:100814835 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02486 5 68866016 68870072 Pumo5g02486 5 68866016 68870072 ECH