Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02466 ATGGTGAATCCAGGATTGTTTTCTGGGAATAAGTCCGTGAATTCGGTGAAAGTAAGCTTTCGGATACCGTATTTTACCCAATGGGGTCAGAGCTTGCTGGTGTGTGGTTCTGTACCACTGCTTGGTTCCTGGAATGTGAAGAAGGGTGTGTTGCTCAGGCCCATTCATCAAGGGGCTGAGCTCATCTGGGGTGGAAGCATCACTGTGCCAAGAGGTTTCCAATGCCAGTACAGCTATTATGTTGTAGATGATAACAAAAATGTTCTTAGACGGGAGATGGGGAAGAAGCGTGAACTGATACTTCCTGAAGGGATTCAGAGTGGCCAGGAGATTGAGTTCCATGATCTTTGGCAGACTGGCTCAGATGCCCTCCCTTTCAGAAGTGCTTTCAAAGATGTAATTTTTCGGCAAAGCTGGGATTTGAGCGACGCAACCGTAGGAGTCAACCACATTAATTTTGAACCAGAAGGAGAAGCTATCTTGGTCCAATTCAAAATTTGCTGCCCAAATATTGAGAAAGACACATCAATATATGTCATTGGTAGCAATACAAAGTTGGGGCAGTGGAAAGTTGAAAATGGACTAAAACTCAGCTATTTTGGTGAATCTGTCTGGAAAGCTGAATGTGTGATGCAAAGGAGTGATTTTCCAATAAAATATAGATATGGCAAATATGACAGGAGTGGGAACTTTTCTATAGAGAGTGGTCCAAATCGAGAAGTCTCTACTAACTCCTCAAGGAATGAGGCAAAATATATTTTTCTTTCAGATGGCATGATGCGGGAAATACCTTGGCGTGGTGCTGGTGTAGCAATCCCCATGTTTTCTGTTAGGTCAGAATCTGATCTGGGTGTTGGAGAGTTTCTTGACCTTAAGTTACTGGTTGATTGGACTGTAGCATCTGGTTTCCATTTAGTTCAACTTTTACCAATCAATGATACATCTGTGCATGGGATGTGGTGGGATTCTTATCCATACAGTTCACTCTCAGTCTTTGCATTGCATCCATTGTACTTGAGAGTACAGGCACTTTCTAAGAACATACCCGAGGAGATCAAGAAAGAGATTGAAAAGGCAAAGCAGCAATTGGATGGGAAGGATGTTGATTATGAGGCTACAATGGCTACTAAACTCTCAATTGCAAAGAAAGTTTTCGCTCAAGAGAAAGATTTGATACTTAATTCAAGTTCCTTTCAGGAGTTCTTTTCTGAGAATGAGGGTTGGTTGAAACCCTATGCTGCTTTCTGTTTCCTGCGGGACTTCTTTGAAACATCAGATCGCACTCAATGGGGTCGTTTTGCTCATTATTCAGAAGATAAGCTAGAGAAACTTGTATCCAAGGATAGCCTGCATTATGAGATAATTTGCTTCCACTACTATGTTCAATACCATTTACATTTACAATTATCAGAAGCTGCAGAATATGCAAGAAAGAAGGGAGTGATACTAAAGGGAGATCTTCCTATTGGAGTTGACAGAAACAGTGTGGATACCTGGGTTTATCCTAATTTGTTCCGAATGAACACTTCTACTGGGGCACCTCCAGATTATTTTGATAAAAATGGCCAGAATTGGGGTTTCCCTACTTATAATTGGGAAGAAATGTCAAAGGACAACTATGGTTGGTGGCGAGCTCGATTGACACAGATGGCAAAATATTTTACAGCTTACAGGATTGATCACATATTGGGATTCTTCCGAATTTGGGAACTTCCAGATCATGCTGCAACAGGTCTCGTTGGAAAATTCCGACCATCTATTCCTCTTAGTCAGGAAGAACTTGAAAGAGAAGGAATATGGGACTTTAATCGCCTAAGTTGCCCATATATTAAGCGGGAACAATTACAGGAAAAATTTGGTGCTGCTTGGACTTTCATTGCAACTACTTTTCTAAATGAAATTGACAAGAGTTTCTATGAGTTCAAGGAGGATTGCAACACAGAGAAAAAAATTGCTTCCAAACTGAAAACTTGTGCAGAAAGTTCTCTCTTGTTGGAGAGTTTAGACAAATTGCGGCGCAATCTCTTTGATCTTTCACAGAATATAGTTCTAATCCGAGATCCAGAGGATCCAAGAAAATTTTATCCTCGTTTCAACCTTGAAGATACCTCAAGTTTCCAGGATTTGGATGATCATAGCAAGAATGTTCTCAAAAGATTATACTATGACTACTATTTCTGTCGTCAAGAGAATCTTTGGAGGCAAAATGCATTGAAGACCCTGCCTGTACTTCTAAATTCATCAGACATGCTGGCCTGTGGGGAAGATTTGGGCCTCATTCCATCTTGTGTCCATCCTGTTATGCAAGAACTGGGATTAGTTGGGTTGCGCATTCAGCGCATGCCCAATGAACCTGATCTGGAATTTGGTATTCCTTCTCAGTACAGCTACATGACGGTATGTGCCCCATCATGTCATGACTGTTCCACCTTGCGTGCTTGGTGGGAAGAAGATGAAGATAGAAGACTCCGGTTTTTCAAGAATGTGATGGAGTCCGATGAGTTGCCGCCGGATCAATGTGTTCCAGAAGTTGCACATTTCATTATAAGGCAACATTTTGAAGCCCCATCAATGTGGGCAATCTTCCCTCTTCAGGACTTGTTAGCATTGAAAGAGGAATATACAACACGCCCTGCAACAGAGGAGACAATCAATGACCCTACGAATCCGAAGCACTATTGGAGATTCCGTGTGCATGTGACTTTGGAATCATTGATCGAGGACAATGATCTCCAAACCACCATCAAAGATCTTGTACATTGGAGCGGAAGATCACTCCCTAAGGAAGAAGACTCAGGAATAGAAGCGAGTCCAGTGTCAGTGTTGTCAGCAGCAGAAGCTCTTTCTGAGAAGAAGAAATTTGCCGGTACCACGGAAAAGCCTGTTCTTGTCAAATAA 2898 0.4189 MVNPGLFSGNKSVNSVKVSFRIPYFTQWGQSLLVCGSVPLLGSWNVKKGVLLRPIHQGAELIWGGSITVPRGFQCQYSYYVVDDNKNVLRREMGKKRELILPEGIQSGQEIEFHDLWQTGSDALPFRSAFKDVIFRQSWDLSDATVGVNHINFEPEGEAILVQFKICCPNIEKDTSIYVIGSNTKLGQWKVENGLKLSYFGESVWKAECVMQRSDFPIKYRYGKYDRSGNFSIESGPNREVSTNSSRNEAKYIFLSDGMMREIPWRGAGVAIPMFSVRSESDLGVGEFLDLKLLVDWTVASGFHLVQLLPINDTSVHGMWWDSYPYSSLSVFALHPLYLRVQALSKNIPEEIKKEIEKAKQQLDGKDVDYEATMATKLSIAKKVFAQEKDLILNSSSFQEFFSENEGWLKPYAAFCFLRDFFETSDRTQWGRFAHYSEDKLEKLVSKDSLHYEIICFHYYVQYHLHLQLSEAAEYARKKGVILKGDLPIGVDRNSVDTWVYPNLFRMNTSTGAPPDYFDKNGQNWGFPTYNWEEMSKDNYGWWRARLTQMAKYFTAYRIDHILGFFRIWELPDHAATGLVGKFRPSIPLSQEELEREGIWDFNRLSCPYIKREQLQEKFGAAWTFIATTFLNEIDKSFYEFKEDCNTEKKIASKLKTCAESSLLLESLDKLRRNLFDLSQNIVLIRDPEDPRKFYPRFNLEDTSSFQDLDDHSKNVLKRLYYDYYFCRQENLWRQNALKTLPVLLNSSDMLACGEDLGLIPSCVHPVMQELGLVGLRIQRMPNEPDLEFGIPSQYSYMTVCAPSCHDCSTLRAWWEEDEDRRLRFFKNVMESDELPPDQCVPEVAHFIIRQHFEAPSMWAIFPLQDLLALKEEYTTRPATEETINDPTNPKHYWRFRVHVTLESLIEDNDLQTTIKDLVHWSGRSLPKEEDSGIEASPVSVLSAAEALSEKKKFAGTTEKPVLVK 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02466 965 CDD CBM20_DPE2_repeat2 162 258 IPR034841 GO:2001070
Pumo5g02466 965 SMART CBM_20_2 15 111 IPR002044 GO:2001070
Pumo5g02466 965 SMART CBM_20_2 159 253 IPR002044 GO:2001070
Pumo5g02466 965 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 154 267 IPR002044 GO:2001070
Pumo5g02466 965 Gene3D Glycosidases 720 925 - -
Pumo5g02466 965 PANTHER - 13 925 - -
Pumo5g02466 965 Gene3D Immunoglobulins 8 119 IPR013783 -
Pumo5g02466 965 Gene3D Immunoglobulins 154 256 IPR013783 -
Pumo5g02466 965 SUPERFAMILY (Trans)glycosidases 265 918 IPR017853 -
Pumo5g02466 965 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 10 119 IPR002044 GO:2001070
Pumo5g02466 965 CDD CBM20_DPE2_repeat1 17 117 IPR034840 GO:2001070
Pumo5g02466 965 Gene3D Glycosidases 265 594 - -
Pumo5g02466 965 Pfam Starch binding domain 16 108 IPR002044 GO:2001070
Pumo5g02466 965 Pfam Starch binding domain 161 250 IPR002044 GO:2001070
Pumo5g02466 965 SUPERFAMILY Starch-binding domain-like 14 117 IPR013784 GO:0030246
Pumo5g02466 965 Pfam 4-alpha-glucanotransferase 272 900 IPR003385 GO:0004134|GO:0005975
Pumo5g02466 965 SUPERFAMILY Starch-binding domain-like 158 247 IPR013784 GO:0030246
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02466 16 927 Glycoside Hydrolase AT2G40840 74.370 0.0 1461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02466 K00705 - gmx:100793021 1888.62