Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02463 ATGACTGCTCAGACTCAAGAGGAGCTTCTTGCGGCCCACCTTGAACAGCAAAAGATCCATGATGATGAGCCTGTAGTTGAGGATGATGATGATGATGATGAGGAAGACGATGATGATGATGAGGATGATGACAATGCTGAAGGTCAAGAAGGTGATGCTTCAGGTAGGTCCAAGCAGACCAGAAGTGAAAAGAAGAGTCGCAAGGCAATGCTCAAACTTGGAATGAAACCTGTCACAGGTGTCAGTCGCGTGACTGTCAAGAAGAGCAAAAATATCCTGTTTGTTATTTCAAAACCAGATGTTTTCAAGAGCCCAACTTCTGACACATACATTATATTCGGGGAAGCGAAGATTGAAGACTTGAGCTCACAGCTACAAACTCAGGCAGCAGAGCAATTCAAGGCTCCTAATGTGAGCAATGTAGGATTGAAGCCTGAAACCTCTGCTGCTGCTCAAGATGACGAGGACGTGGATGTGGACGTGGACGAGACTGGTGTAGATCCCAAGGATATAGAGTTGGTGATGACTCAAGCTGGTGTGTTGAGATCAAGAGCTGTTAAGGCTCTCAAAGCTGCCAATGGCGACATTGTCGCTGCCATTATGGAGCTAACTAATTGA 618 0.4595 MTAQTQEELLAAHLEQQKIHDDEPVVEDDDDDDEEDDDDDEDDDNAEGQEGDASGRSKQTRSEKKSRKAMLKLGMKPVTGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIIFGEAKIEDLSSQLQTQAAEQFKAPNVSNVGLKPETSAAAQDDEDVDVDVDETGVDPKDIELVMTQAGVLRSRAVKALKAANGDIVAAIMELTN 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02463 205 MobiDBLite consensus disorder prediction 49 70 - -
Pumo5g02463 205 Gene3D - 69 122 IPR038187 -
Pumo5g02463 205 FunFam Nascent polypeptide-associated complex (NAC), alpha subunit 70 122 - -
Pumo5g02463 205 MobiDBLite consensus disorder prediction 1 71 - -
Pumo5g02463 205 ProSiteProfiles NAC A/B domain profile. 60 125 IPR002715 -
Pumo5g02463 205 Pfam HYPK UBA domain 165 204 IPR044034 -
Pumo5g02463 205 SMART NAC_2 63 119 IPR002715 -
Pumo5g02463 205 MobiDBLite consensus disorder prediction 24 48 - -
Pumo5g02463 205 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 21 204 IPR016641 GO:0005854
Pumo5g02463 205 Gene3D - 165 203 - -
Pumo5g02463 205 Coils Coil 200 205 - -
Pumo5g02463 205 Pfam NAC domain 63 118 IPR002715 -
Pumo5g02463 205 CDD NAC_NACA 74 121 - -
Pumo5g02463 205 CDD UBA_NAC_euk 168 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02463 Pumo-Chr5 67770611 67772744 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02463 K03626 - gmx:100527254 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02463 5 67770611 67772744 Pumo5g02463 5 67770611 67772744 ECH