Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02458 ATGAGCCTCTTGTGCACCCTCAAACACAGGATCCTCCCTCCAACCCCCTCACCCTTCACCCTCTTCATCCAACGGCGATGGAAGAAGCCCACCGTCTCCGCCCAGACCCGTTTGGAGGACAGAGTAAGAGACCCCCACCTCGACAAACTCATGGCCCACCTCAAAAGACTCGACCTTGTCCTCAAAACCCACCACCTCATGTCCACGCGCAAGCGCGGCCCCTTCGTCTCCCTCACCCTCATGTCCCGCTGGAGAAACATCCTCGGACTCAACGTCCCCGTGGGGCCCTTCCTCCACAAATATCCCCACGTGTTCCACGTTTTTACCCACCCTTTTAAGAAAAACACGTGCTGCAGGATCACGAAAAGGATGAAAGAGTTGATCTTGCTTGAAGGGGTAGTGGTGAGGCAGCAGGAGGTGGAGGTTGTGAAGAGGATGAAGAAGTTGTTGATGATGTCCGTGAGTGGCACTCTTCGCTTGCACGCTTTGAGGATGATCAAAAGAGAATTGGGTCTCCCTGAGGATTTCAGAGACTCCATTCTTGGGAAGTATAGTGGGGATTTTAGGTTGGTTGATTTGGAGGTTGTGGCATTGGTTGATTGGGATGCTGAATTGGGAGTGGCTCAGGTTGAGAAATGGAGGGAAAAGGAATACACAGAGAAGTGGTTGAGTGAGTTTGAGACTAAGTTCGCATTTCCCATTAGTTTCCCAACTGGGTTTAAGTTTGAGAGAGGGTTTAGGGAGAGGTTGAAGAATTGGCAGAGGCTTCCTTATGCTAAGCCTTATGAGAGGAAGGAGGTTGTTCGGGTGAGGACGTGTGGAGGGATCGAGCGGTATGAGAAGAGGGCTGTGGCTGTTCTTCATGAGCTGTTGAGCTTGACTGTGGAGAAAATGGTTGAGGTTGATCAGTTGGCTCATTTTCGGAGGGACTTTGGTATCGAAGTTAACATGCGTGAATTGCTGCTAAGGCATCCTGGTATATTTTACATATCTACTAAAGGGAAGACTCTAACTGTTTTTCTTAGGGAAGCGTATAGGAAAGGGGGTTTGGTCGAGCCGAATCCCGTGTATGAGGCGCGTAGGAATATGTTGGATCTTGTGTTGTTAGGGTGTAGGAAAACCAAGCAATTGTTAGATTGTGATGAGTCTAATAAGGAAGAGAGTAATACTGTAGTCTGTGAAGTCAATGAGGAAGGTGAAAGACAAGGAGATTGGGTGATTCCTTTCTTGGAGAATTGTGAGGAGAGTAGATCCCCTTGA 1260 0.4889 MSLLCTLKHRILPPTPSPFTLFIQRRWKKPTVSAQTRLEDRVRDPHLDKLMAHLKRLDLVLKTHHLMSTRKRGPFVSLTLMSRWRNILGLNVPVGPFLHKYPHVFHVFTHPFKKNTCCRITKRMKELILLEGVVVRQQEVEVVKRMKKLLMMSVSGTLRLHALRMIKRELGLPEDFRDSILGKYSGDFRLVDLEVVALVDWDAELGVAQVEKWREKEYTEKWLSEFETKFAFPISFPTGFKFERGFRERLKNWQRLPYAKPYERKEVVRVRTCGGIERYEKRAVAVLHELLSLTVEKMVEVDQLAHFRRDFGIEVNMRELLLRHPGIFYISTKGKTLTVFLREAYRKGGLVEPNPVYEARRNMLDLVLLGCRKTKQLLDCDESNKEESNTVVCEVNEEGERQGDWVIPFLENCEESRSP 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02458 419 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 23 395 IPR045040 GO:0003723
Pumo5g02458 419 Pfam Plant organelle RNA recognition domain 42 371 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02458 Pumo-Chr5 67697857 67699497 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02458 - - gmx:100789857 778.474