Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02457 ATGGCTTCCTTCCCTCCCCCTGGTTCACTCACTCTCTGCGAAGTCAATCGTGACCTAATCACCGTTGACGCCCTCTCCGACGATCGAGCCAACCAAACCTACGGAAAAATCCTCGGATTGGTGTTCAGTCCTGTCCCGTTTCACTCTCTGGAGAGTGACGCTTCCGATCAGGAAGGAGCAACAACGACGGCGACCGCCGCCGGAGAAAGCGTTCAGAGGAAAGGTCCGGTGGCACTCTTGCAAGGGCTTGTAAACAGCTATCTGGGACGCCTCTTTTACCCTAACGATGTGCATTTGTTGCCAGAGGTTGATCTTCAAGGAGTAAGCTGGCACCCTAATAAGCATATAATTGCTTTTATCTCTGCCCCAACACAAGTTTTAGTTCGTGATTACCAAGAGTCTGAGGGGAAGGATCCAAGTATTTTGACAAACGAATCGCAGAGAGATGTTAGAGTGCTGGAGTGGAGGCCCAATGGTGGGAAAATGCTTGCTGTGGGTTGCAAGGGTGGAATTTGCATTTGGGCTGCTTCTTATCCTGGAAATGCTGCATCTGTTAGATCTGGCGCTGCTTCCTTTTTAGGAAGTTTGTCTAGAAGCTCAGGAAATCGGTATATCCTGGTCGATTTTCTTCGTAGTCCATATGATGAGCATGTTAGTGCTCTCACTTGGAGTCCAGATGGAAGATATCCTCATAAATCATCTGCTTCATATGAAAGCTCCTCATTCACTGTGTGGGATTTTGCTCAAGGTGTGGGGACACCCATTCGACGTGGATTAGGAGGCATATCAATGCTGAAGTGGTCACCTACTGGAGATTACTTCTTTGCTTCAAAATTTGATGGAACATTTTATCTTTGGGAGACAAACACATGGACATCAGAACAATGGTCATCAACTAGTGGTTTTGTCAAGGGTGCAACATGGGATCCAGATGGGCGTATGATACTTCTTGCATTTTCTGAATCGTCAACTTTGGGATCTATTCACTTTGCATCAAAGCCTCCCTCATTAGATGCACATTTGTTACCTGTTGATTTGCCAGAAAGCAGTCAGGGAATTGAAAAGATAGCATGGGATAATTCAGGGGAGCGATTGGCTGTGTCTTTTAAAGGTGGAGATGATGCGTACAGGGGTCTGATCGCCATATATGATACAAGAAGGACTCCTCTTATATCTACATCATTAATTGGATTTATAAGAGGGCCTGGAGACAATCCAAAGCCAATCTCATTTTCATTTCACGGGAAGTTTAAGCAGGGACCATTGCTTTCTGTGGCATAA 1281 0.4582 MASFPPPGSLTLCEVNRDLITVDALSDDRANQTYGKILGLVFSPVPFHSLESDASDQEGATTTATAAGESVQRKGPVALLQGLVNSYLGRLFYPNDVHLLPEVDLQGVSWHPNKHIIAFISAPTQVLVRDYQESEGKDPSILTNESQRDVRVLEWRPNGGKMLAVGCKGGICIWAASYPGNAASVRSGAASFLGSLSRSSGNRYILVDFLRSPYDEHVSALTWSPDGRYPHKSSASYESSSFTVWDFAQGVGTPIRRGLGGISMLKWSPTGDYFFASKFDGTFYLWETNTWTSEQWSSTSGFVKGATWDPDGRMILLAFSESSTLGSIHFASKPPSLDAHLLPVDLPESSQGIEKIAWDNSGERLAVSFKGGDDAYRGLIAIYDTRRTPLISTSLIGFIRGPGDNPKPISFSFHGKFKQGPLLSVA 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02457 426 Pfam Anaphase-promoting complex subunit 4 WD40 domain 108 182 IPR024977 -
Pumo5g02457 426 Gene3D - 95 206 IPR015943 GO:0005515
Pumo5g02457 426 SUPERFAMILY DPP6 N-terminal domain-like 106 415 - -
Pumo5g02457 426 PANTHER ALADIN/ADRACALIN/AAAS 2 426 IPR045139 -
Pumo5g02457 426 FunFam Aladin isoform A 210 426 - -
Pumo5g02457 426 SMART WD40_4 248 287 IPR001680 GO:0005515
Pumo5g02457 426 SMART WD40_4 135 175 IPR001680 GO:0005515
Pumo5g02457 426 SMART WD40_4 203 246 IPR001680 GO:0005515
Pumo5g02457 426 Gene3D - 209 419 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02457 Pumo-Chr5 67690610 67697172 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02457 K14320 - gmx:100808599 813.527