Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02449 ATGGAGTTCTGTTCTTTCAAGGCTTCATTCGGTGTTATACTCTATTGCTTCGTGATTTATTTTGTTGCTTTTCAGTATTGCTGTGTTGATGCAAACTCAACGCTAGTTGTAAATGCTGCTTATAATGCGTCTACAAGACGAATTCCTGACACTTTTCTTGGAGTATTCATTGAGGAGATTAATCATGCTTGTGCTGGCGGACTGTGGGCAGAACTTGTTAGCAATAGAGGCTTTGAAGCTGGAGGCCCCAACAATACCTTAAATATTTATCCTTGGTCAATTATTGGAAATGAATCATCCATTTCTGTATCAATTAACCGTACCTCATGCTTTGAGCGTAATAAAGCTGCATTACAAATGGAGGTGCATTGTGGTGGTCACAACCCTTGCCCATCTAATGGCGTTGGTGTCTCTAACCCTGGTTATTGGGGCATGAATATTGAGCAAGGGAAGAGGTATAAGGTGGTCTATCATGTTAAATCAGAAGGAAAATTTGCTTTTCAACTTTCATTCACGGGTGTTGATGTTATAAAAGTGGCATCAAATATCACGCAAGTTTCTGGAGATGGAAAATGGAACAGGGTGGAGACTATAGTGGAAGCAAATGCTACTAATCATTATTCAAGTCTTCAAATAACCACAACCACTGAAGGGACTTACTTGTTAGACCAGGTGTCAGCTATGCCATTGGACACTTACATGGGCCATGGCTTCCGAAATGACCTTTTTCAAATGGTGGCAGATTTGAAACCAAAATTTCTCAGATTTCCGGGTGGTACTTATGTTGAAGGAATTCAACTGGAAAATCAATATCGGTGGAAAGATACTATTGGATCATGGGAAGAGAGGCCTGGGCACTTTAATGATGTTTGGAACTATTGGAGTGACGATGGAATTGGTTATTTAGAGTATCTCCAACTAGCAGAGGACCTTGGTACATTGCCAATATGGGTGTTTAACGCTGGTATCAGCGTTCGTGCTGAAATTAATACATCAGCCATAGCACCTTATGTGCAAGATGCCCTGGATGGCATTGAATTTGCAAGAGGCTCTCCTAAATCAAAATGGGGTTCTGTTAGAGCTGCAATGGGACATCCTAATCCATTTGACTTAAAATATGTTGCCGTTGGAAATGAAGATTGTGGTCATGTTAATTATCAAGGAAATTACCTTAAGTTCTATGAGGCTATAAGAGTTGCCTACCCAGATATTCAAATTATCTCAAATTGTGATGCTTCTAGCGGATCATTAAATCATCCAGCTGATTTATTCGATTTCCATACATATACAAGCTCCAATGGCATGTTTTCTCTATCTACTAAGTTTGACCACACATCACGATCTGGTCCAAAGGCTTTTGTTAGTGAATATGCTGTGTGGAGAGAAGATGCTGCAAATGGAAGTCTTTTGGCTGCTGTGGCTGAAGCCGCATTTCTTATTGGACTAGAAAAGAACAGTGATATCGTGGAGATGGTTTCTTATGCACCACTTTTCTTAAATATAAATGACAGGAAATGGATTCCCGATGCAATTGTGTTCGACTCTTATAAGCTTTATGGAACTCCTAGTTATTGGGTGCAGAAACTTTTTATCGAGTCCAGTGGAGCAACATTTCTTGACTCAACACTCAATACAACTTCATCTAATAAACTTATTGCATCTTCAATTATTTGGCAAAATTCTACAGATAAGAAAAATTACCTAAGAATAAAGGTAAGACGAGTCCTTTTCAACTAA 1737 0.3921 MEFCSFKASFGVILYCFVIYFVAFQYCCVDANSTLVVNAAYNASTRRIPDTFLGVFIEEINHACAGGLWAELVSNRGFEAGGPNNTLNIYPWSIIGNESSISVSINRTSCFERNKAALQMEVHCGGHNPCPSNGVGVSNPGYWGMNIEQGKRYKVVYHVKSEGKFAFQLSFTGVDVIKVASNITQVSGDGKWNRVETIVEANATNHYSSLQITTTTEGTYLLDQVSAMPLDTYMGHGFRNDLFQMVADLKPKFLRFPGGTYVEGIQLENQYRWKDTIGSWEERPGHFNDVWNYWSDDGIGYLEYLQLAEDLGTLPIWVFNAGISVRAEINTSAIAPYVQDALDGIEFARGSPKSKWGSVRAAMGHPNPFDLKYVAVGNEDCGHVNYQGNYLKFYEAIRVAYPDIQIISNCDASSGSLNHPADLFDFHTYTSSNGMFSLSTKFDHTSRSGPKAFVSEYAVWREDAANGSLLAAVAEAAFLIGLEKNSDIVEMVSYAPLFLNINDRKWIPDAIVFDSYKLYGTPSYWVQKLFIESSGATFLDSTLNTTSSNKLIASSIIWQNSTDKKNYLRIKVRRVLFN 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02449 578 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 12 574 - -
Pumo5g02449 578 Gene3D Glycosidases 225 532 - -
Pumo5g02449 578 Gene3D - 70 224 - -
Pumo5g02449 578 FunFam Alpha-L-arabinofuranosidase 1 225 531 - -
Pumo5g02449 578 Pfam Alpha-L-arabinofuranosidase C-terminal domain 456 547 IPR010720 GO:0046373|GO:0046556
Pumo5g02449 578 SMART alpha_l_af_c 455 575 IPR010720 GO:0046373|GO:0046556
Pumo5g02449 578 SUPERFAMILY (Trans)glycosidases 210 538 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02449 Pumo-Chr5 67601845 67606881 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02449 1 571 Glycoside Hydrolase AT3G10740 59.794 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02449 K01209 - gmx:100787734 951.044