Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02414 ATGAGCAACGACATATTTGATGGACAGTTGTTAGCAGAGAAGTTGTTGAAACTCAACAATTCACAACAAAGCATTGAATCACTGTCCCATTGGTGTATTTCTCACCGGAAGAGAGCAAAAGAAATAGTTGAAACTTGGGATAAATTGTTCAATGCTTCCCAGAAAGAGCAGCGTGTCTCTTTTCTATACTTGGCTAATGACATCTTGCAAAATAGTAGGCGAAAGGGTAGTGAGTTTGTCAACGAATTCTGGAAAGTTCTTCCAGCAGCTCTCAGGCATGTTTATGAAAGTGGTGATGAAAATGGAAGGAAAGCAGTGACCAGACTAGTTGACATATGGGAGGAGAGGAAGGTTTTTGGTTCACGAGGTCAAGGTCTTAAGGATGAAATAATGGGCAAGAATCCCCTTCCATCTGCAAGCAATGGAAAGAGTTCAAATTCTATCAAGATAGTGAAGAGGGACACCCACTCAGTGAGAATTAAACTGGCTGTTGGGTGCTTGCCAGAGAAAATACTAACAGCATTTCAGCCTGTTCTTGATGAACATCTTAATGAGGAAGCTTCCTTAAACAACTGCAGTGCTGCTGTGCGCGATGTGGGTAAAGTTCTGGAAGATGTTGAAAATACATTGGCTCAAGGAAACCAGTTGGGATCTACTTTGGTGAATGACTTACAAGAGCAGGAAAAAAAGCTTAAACAATATATAGAGCAACTTGAAAATGCTGAGGCTGCAAGGGCTTCATTGCTTTCTCAGCTTAAACACGCACTTCAGGAACAAGTACAGTTGTTTCTACAAGTTGCTCGAGGGCAGATTGAGAAAGCGGTTGGTATCAGGAAACAGCTTAACCAAGCAGCAGAAGCCACAGATCCATCTCAGCCTACTTTTGTTCAATCTTCTGCATCATTTGCTCCTTTCCAAACTACTGAAGATGATAACAAGAAGGCAGCAGCTGCCGCCGTTGCTGCTAAGCTTGCTGCCTCTGCATCCTCTGCCCAGATGCTTACATCTGTTCTTTCTTCTCTTGTAGCTGAAGAAGCTGCCTCCTTGAATGGTAGCTTAAACTCTACAGGATTTTCATCAGGATTACCTATTTTCAACCCAGAGAAAAGACCTAAACTTGAAAAACCAACACCTGCTCTTGATGTTAGCAGTTCTGATATGGCCAACTCTCCCTTTTATGCCACTATGCAACAGCCATCACTGGCAAATGTACCACTTGCACCTTCAGTCGGCATGCAAACCGTGTCTCAAGCCAATCAATTACAAGCTGCATTTGCTTCAGCACCCCCTCCCCCGCCTCATTCTTCGGCAAATCAACCATCAAACCAATATGTCCAACCAACTGGTTTGATGGCTGGGGGAATTCCTTATGGATATGGATCAAATAGCCTACCACCTCCACCTCCTTTGCCTCCACATGTGGCAATGGGGTTATCAATGCCTGGCACTCAACCAGCTCAGCAGCAACAGCAGTCTCCGCCGGGAGGATTCTACAGGCCACCTGGCATAGGGTTTTATGGGCAAAGCCACCCATCGACACCACCGCCAGTACCTAGGCAGTGA 1563 0.4485 MSNDIFDGQLLAEKLLKLNNSQQSIESLSHWCISHRKRAKEIVETWDKLFNASQKEQRVSFLYLANDILQNSRRKGSEFVNEFWKVLPAALRHVYESGDENGRKAVTRLVDIWEERKVFGSRGQGLKDEIMGKNPLPSASNGKSSNSIKIVKRDTHSVRIKLAVGCLPEKILTAFQPVLDEHLNEEASLNNCSAAVRDVGKVLEDVENTLAQGNQLGSTLVNDLQEQEKKLKQYIEQLENAEAARASLLSQLKHALQEQVQLFLQVARGQIEKAVGIRKQLNQAAEATDPSQPTFVQSSASFAPFQTTEDDNKKAAAAAVAAKLAASASSAQMLTSVLSSLVAEEAASLNGSLNSTGFSSGLPIFNPEKRPKLEKPTPALDVSSSDMANSPFYATMQQPSLANVPLAPSVGMQTVSQANQLQAAFASAPPPPPHSSANQPSNQYVQPTGLMAGGIPYGYGSNSLPPPPPLPPHVAMGLSMPGTQPAQQQQQSPPGGFYRPPGIGFYGQSHPSTPPPVPRQ 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02414 520 SMART 558neu5 10 131 IPR006569 -
Pumo5g02414 520 MobiDBLite consensus disorder prediction 425 520 - -
Pumo5g02414 520 FunFam ENTH/VHS family protein isoform 1 3 131 - -
Pumo5g02414 520 ProSiteProfiles CID domain profile. 3 135 IPR006569 -
Pumo5g02414 520 MobiDBLite consensus disorder prediction 461 475 - -
Pumo5g02414 520 Coils Coil 217 258 - -
Pumo5g02414 520 MobiDBLite consensus disorder prediction 481 495 - -
Pumo5g02414 520 Gene3D - 4 131 IPR008942 -
Pumo5g02414 520 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 8 517 - -
Pumo5g02414 520 CDD CID_RPRD_like 9 131 - -
Pumo5g02414 520 Pfam CID domain 10 121 IPR006569 -
Pumo5g02414 520 SUPERFAMILY ENTH/VHS domain 16 118 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02414 Pumo-Chr5 67169953 67184399 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02414 K15559 - gmx:100800067 829.706