Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02409 ATGGAGGGGAATAATCTAGAGAAGAAGTTGCTGAGCAGACAGAAAGTGTCAGAGGAAGAAGAAGAAGAAGAGAAAGTATCATTGGTGAAGAGGGTGTGGAAAGAGAGCAAGGTGATGTGGATAGTGGCAGCACCAGCCATATTCACAAGGTTCACCACCTTTGGGATCAGTGTTATAAGCCAAGCATTTATTGGTCATATTGGTTCAAGGGAACTCGCTGCTTATGCTCTTGTTTTCACTGTCATCATACGCTTTGCCAATGGTATTCTGTTGGGAATGGCGAGTGCGTTGTCAACACTTTGTGGACAAGCATATGGTGCAAAAGAATATCAGATGATGGGAGTGTATCTTCAAAGATCATGGATAGTTTTATTCTTAACTGCACTCTGTCTTCTTCCGTTGTTCGTCTTCACAAGCCCAATTTTGACGCTCTTAGGCCAAAATGAGAGCATAGCACAAATGGCAGGAAACATTTCTCTTTGGTCAATTCCTATCTTATTTGCTTATATTGTCTCATTCAATTGCCAGACATTCCTTCAATCTCAAAGCAAGAATGTCATTATTGCATTCTTGGCAGCTTTATCAATAATCATTCATGTGTCTCTCTCTTGGCTATTCACAATACAATTCAAGTTTGGGATTCCTGGTGCAATGATTTCAACAATTTTGGCATACTGGATTCCCAATATTGGTCAACTGATATTTATTACATGTGGTTGGTGCCCTGAAACATGGAAAGGTTTCTCTTCTTTAGCATTCAAAGATCTTTGGCCTGTTGTCAAGCTTTCCCTTTCATCTGGTGCCATGTTATGTCTTGAGCTCTGGTACAACACAATATTGATTCTTTTGACTGGTAACATGAAAAATGCTGAGGTTGAAATTGATGCTCTCTCTATATGTATTAACATCAACGGATGGGAAATGATGATAGCACTTGGTTTCATGGCTGGAGCAAGTGTTCGAGTGGCAAATGAACTTGGAAGAGGAAGCTCCAAAGCTGCAAAGTTCTCTATAGTTGTGACAGTGCTTACATCCTTTTCAATTGGGTTTATCTTATTTATAATTTTCTTACTTTTAAGAGAAAGAGTAGCTTATCTGTTTACTTCAAACGAAGAGGTGGCTATTGCTGTTGGGGATTTGTCACCTTTGTTGGCAATTTCTTTGTTACTAAATAGTATTCAACCTGTACTCTCAGGGGTGGCTGTTGGAGCAGGGTGGCAGAGCATTGTAGCATATGTGAACCTAGGCTGTTATTACCTCATAGGTATTCCAGTTGGACTAGTGCTTGGTAACATTATTCACTTGCAAGTCAAGGGTATTTGGCTAGGAATGTTGTTTGGGACACTAATTCAAACTATAGTCCTAACTATAATCACCTACAAAACTAATTGGGATGAGCAGGTAACTATAGCCCGTAATCGTATTAGTAAGTGGTCTAAGGTGGACCTTGATCATGAAACAATTACATCACATCATTAG 1479 0.3962 MEGNNLEKKLLSRQKVSEEEEEEEKVSLVKRVWKESKVMWIVAAPAIFTRFTTFGISVISQAFIGHIGSRELAAYALVFTVIIRFANGILLGMASALSTLCGQAYGAKEYQMMGVYLQRSWIVLFLTALCLLPLFVFTSPILTLLGQNESIAQMAGNISLWSIPILFAYIVSFNCQTFLQSQSKNVIIAFLAALSIIIHVSLSWLFTIQFKFGIPGAMISTILAYWIPNIGQLIFITCGWCPETWKGFSSLAFKDLWPVVKLSLSSGAMLCLELWYNTILILLTGNMKNAEVEIDALSICININGWEMMIALGFMAGASVRVANELGRGSSKAAKFSIVVTVLTSFSIGFILFIIFLLLRERVAYLFTSNEEVAIAVGDLSPLLAISLLLNSIQPVLSGVAVGAGWQSIVAYVNLGCYYLIGIPVGLVLGNIIHLQVKGIWLGMLFGTLIQTIVLTIITYKTNWDEQVTIARNRISKWSKVDLDHETITSHH 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02409 492 CDD MATE_eukaryotic 35 468 IPR045069 GO:0042910|GO:1990961
Pumo5g02409 492 NCBIfam MATE family efflux transporter 45 441 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo5g02409 492 Pfam MatE 268 427 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo5g02409 492 Pfam MatE 45 205 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo5g02409 492 PANTHER MULTIDRUG RESISTANCE PROTEIN 28 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02409 Pumo-Chr5 67046594 67086312 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02409 K03327 - gmx:100789145 842.417