Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02408 ATGTGGATAGTGGCAGCCCCAGCCATATTCACTGAACTCTCCACCTTTGGTATCAATGTTATAAGCCAAGCAATTATTGGCCATATTGGCTCTAGAGAACTCGCTGCTTTTGCTATTCAATGTCCTTATAGGCTTCGCGAATGGTATTCTGCCCCAAAAACTCGAAAAATGGAGAGGGATCTAAAGCACAAGTTGATGAGCACAGAGAAAATATCAGAAGAGGAATTATCATTGGTGAAGAAGGTGTGGAAAGAGAGCAAGTTGATGTGGATAGTGGCAGCACCGGCCATGTTCACTAAATTCTCCACCATTGGTATCAATGTTATAAGCCAAGCATTTTTTGGTCATATTGGCTCATCGGAACTCGCTGCTTTTGCTCTTGTTTTCACCGTCATTGTTCGTTTCGCCATTGGTATTCTGTTAGGAATGGCGAGTGCGTTGTCAACACTTTGTGGACAAGCATACGGTGCAAAAGAATATGGCATGATGGGAGTGTATCTTCAAAGATCATGGATAGTTTTATTCTTAACTTCACTCTGTCTTCTTCCTCTGTTGATCTTCACAAGCCCAATTTTGTTATTCTTAGGGCAAGATGAGAGCATAGCAGAAGTGGCAGGAACCATTTCTCTTTGGTCAATTCCTATCTTATTTGTTTATTTTGTCTCATTCACTTGCCAGTCATTCCTTCAATCTCAAAGCAAGAATGTCATTATTGCATTCTTGGCAGCTTTATCAATAATCATTCATGTGTCTCTCTCTTGGCTACTCACAATACAATTCAAGTTTGGGATTCCTGGTGCAATGACTTCAACAATTTTGGCATACTGGATTCCCAATATTGGTCAACTAATATTTATTACATGGGGTTGGTGCCCTCAAACATGGAAAGGTTTCTCTATTTTAGCATTCAAAGATCTTTGGCCTGTTGTCAAGCTTTCCCTTTCATCTGGTATCATGTTATGTCTTGAGCTCTGGTACAACACAGTATTAATTCTTTTAACGGGCAACATGAAAAATGCAGAGGTCCAAATTGATGCTCTATCTATATGCCTCAACATCAATGCATGGGTACTGATGATATCACTTGGTTTCATGTCTGCTGCAAGTGTTCGAGTGGCAAACGAGCTTGGAAGAGGAAGCTCCAAAGCTGCAAAGTTCTCTATAGTTGTGACGGTGCTTACCTCCTTCGCCATTGGATTCATTCTCTTCTTATTTTTCTTACTTTTAAGAGAAAAAATAGCTTATCTGTTTACTTCAAGTGAAGAGGTAGTTATTGCTGTTGGGGATTTGTCACCTTTGTTGGTAGTTTCTTTGTTACTAAATAGTGTTCAACCAGTACTCTCAGGGGTAGCTGTTGGAGCAGGGTGGCAGAGCATTGTAGCATATGTGAACATAGGGTGTTATTACCTCATAGGTATTCCGGTTGGAATAGTGCTTGGTAACATTATTCACTTGCAAGTCAAGGTGAATATAGTCCGAAATCGTATTAATAAGTGGTCTAAGCTGGAGTTTGATCATGAAACAATTGCATCAGATAAATAG 1542 0.4001 MWIVAAPAIFTELSTFGINVISQAIIGHIGSRELAAFAIQCPYRLREWYSAPKTRKMERDLKHKLMSTEKISEEELSLVKKVWKESKLMWIVAAPAMFTKFSTIGINVISQAFFGHIGSSELAAFALVFTVIVRFAIGILLGMASALSTLCGQAYGAKEYGMMGVYLQRSWIVLFLTSLCLLPLLIFTSPILLFLGQDESIAEVAGTISLWSIPILFVYFVSFTCQSFLQSQSKNVIIAFLAALSIIIHVSLSWLLTIQFKFGIPGAMTSTILAYWIPNIGQLIFITWGWCPQTWKGFSILAFKDLWPVVKLSLSSGIMLCLELWYNTVLILLTGNMKNAEVQIDALSICLNINAWVLMISLGFMSAASVRVANELGRGSSKAAKFSIVVTVLTSFAIGFILFLFFLLLREKIAYLFTSSEEVVIAVGDLSPLLVVSLLLNSVQPVLSGVAVGAGWQSIVAYVNIGCYYLIGIPVGIVLGNIIHLQVKVNIVRNRINKWSKLEFDHETIASDK 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02408 513 PANTHER MULTIDRUG RESISTANCE PROTEIN 78 485 - -
Pumo5g02408 513 NCBIfam MATE family efflux transporter 95 486 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo5g02408 513 CDD MATE_eukaryotic 85 488 IPR045069 GO:0042910|GO:1990961
Pumo5g02408 513 Pfam MatE 318 477 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo5g02408 513 Pfam MatE 95 255 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02408 Pumo-Chr5 66980938 66986742 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02408 K03327 - gmx:100777237 707.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02408 5 66980938 66986742 Pumo5g02408 5 66980938 66986742 ECH