Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02406 ATGGAGGGGCGTCTGAAGGAGAAGTTGCTGAGCAAAGAGCAAGAAGAAGAGGAGTTATCATTGGTGAAGAGGGTATGGAATGAGAGCAAGTTGATGTGGGTAGTGGCAGCACCAGGCATATTCACTAGGTTCTCCACCTTTGGTATCAGTGTTATAAGCCAAGCATTTATTGGTCATATTGGTTCAAGGGAACTTGCTGCTTATGCTCTTGTGTTCACTGTTCTCATACGCTTTGCCAATGGCATTCTGTTAGGAATGTCGAGTGCATTGGCAACACTTTGTGGACAAGCATATGGTGCAAAAGAATATGGCATGATGGGAGTGTATCTTCAAAGATCATGGATAGTTATGTCCTTAACTGCACTCTGTCTTGTTCCGGTGTTCATCTTCACAAGCCCAATTTTGACGCTCTTAGGCCAAGATGAGAGCATAGCACAAGTGGCAGGAAACATTTCTCTCTGGTCAATTCCTATCATATTTTCTTTTATTGTCTCGTTCACTTGCCAGAATTTCCTGCAATCTCAAAGCAGGAATACTATTATTGCTTTCTTGGCAGCTTTATCAATAATCATTCATGTGTCTCTCTCTTGGCTATTCACAATACAATTCAAGTATGGGATTCCTGGTGCAATGATTTCAACAATTTTGGCATACTGGATTCCCAATATTGGTCAACTAATATTTGTTACATGTGGTTGGTGCTCTGATACATGGAAAGGTTTCTCATTTTTAGCATTCAAAGATCTTTGGCCTGTTGTCAAGCTTTCCCTTTCATCTGGTGTCATGTTATGTCTTGAGCTCTGGTACAACACAATATTGGTTCTCTTAACGGGCAACTTGGAAAATGCAGAGGTCCAAATTGATGCTCTATCTATATGCCTCAACATCAATGGATGGGAAATGATGATATCACTTGGTTTCATGGCTGCTGCAAGTGTTCGAGTGGCAAACGAGCTTGGAAGAGGAAGCTCCAAAGCTGCAAAGTTCTCTATAGTTTTGACAGTGCTTACATCCTTTGCCATTGGCTTCATTCTCTTCTTACTTTTCTTATTTTTAAGGGAAAAGCTTGCTTACATATTTACCACAAATAAAGACGTGGCCGATGCTGTTGGGGACTTGTCACCTTTGTTGGCAATCTCTATTCTACTAAACAGTGTCCAACCTGTACTCTCAGGAGTTGCTGTTGGAGCAGGGTGGCAAAGCATTGTGGCATATGTGAACATAGGCTGTTATTACATCATAGGTATTCCTGTAGGAGTTGTGCTTGGTAACGTTTTGCATTTGCAAGTCAAGGGTATTTGGATTGGAATGTTGTTTGGAACATTTATTCAAACTGTAGTGCTACTTGTAATCACATACAAAACTAATTGGGACGAGCAGGTAACTAAAGTTCGTAATCGTATTAACAAGTGGTCGAAGGTGGACTCTGATCATGAAACAATTACATCAGATAATTAG 1458 0.4074 MEGRLKEKLLSKEQEEEELSLVKRVWNESKLMWVVAAPGIFTRFSTFGISVISQAFIGHIGSRELAAYALVFTVLIRFANGILLGMSSALATLCGQAYGAKEYGMMGVYLQRSWIVMSLTALCLVPVFIFTSPILTLLGQDESIAQVAGNISLWSIPIIFSFIVSFTCQNFLQSQSRNTIIAFLAALSIIIHVSLSWLFTIQFKYGIPGAMISTILAYWIPNIGQLIFVTCGWCSDTWKGFSFLAFKDLWPVVKLSLSSGVMLCLELWYNTILVLLTGNLENAEVQIDALSICLNINGWEMMISLGFMAAASVRVANELGRGSSKAAKFSIVLTVLTSFAIGFILFLLFLFLREKLAYIFTTNKDVADAVGDLSPLLAISILLNSVQPVLSGVAVGAGWQSIVAYVNIGCYYIIGIPVGVVLGNVLHLQVKGIWIGMLFGTFIQTVVLLVITYKTNWDEQVTKVRNRINKWSKVDSDHETITSDN 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02406 485 Pfam MatE 38 198 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo5g02406 485 Pfam MatE 261 420 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo5g02406 485 NCBIfam MATE family efflux transporter 40 434 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo5g02406 485 PANTHER MULTIDRUG RESISTANCE PROTEIN 21 457 - -
Pumo5g02406 485 CDD MATE_eukaryotic 28 463 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02406 Pumo-Chr5 66963562 66967503 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02406 K03327 - gmx:100789487 827.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02406 5 66963562 66967503 Pumo5g02406 5 66963562 66967503 ECH