Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02396 ATGAACATGAACATGAACACTACTAAGAGCAGGTTGATCATCACCCTTTGGGTTGTGCTCTATTTTTGTTCCATCACAAACTCACTAGCTTCAAAATCAAAGCAGTGCCATTTCCCTGCCATGTTCAACTTTGGTGACTCCAATTCAGACACTGGAGGCCTCTCTGCTGCCTTTGGACAAGCTGGCCCTCCCCATGGAGAGTCCTACTTTCATCACCCTGCTGGCCGTTACTGTGATGGCCGTCTCATTGTTGATTTTATTGCTAAGAAGCTTGGCCTGCCTTATTTGAGTGCATATCTTGATTCCGTTGGGTCAAATTATAGCCATGGAGCCAACTTTGCAACTGCTGGATCCACCATTAGACCCCAGAATACAACCCTTCATCAGACTGGTGGTTTCAGTCCTTTCTCTTTGGATGTTCAATTCGTTCAATTCAGTGATTTCCAGCGCAGGACACAATTTTTTCGCAATAAAGGTGGAGTATATAAAACATTGTTACCAAAAACAGAAGATTTTTCTCAAGCATTATACACGTTTGATATTGGTCAAAATGACTTGACATCCGGTTACTTCCACAACATGTCCACGGATCAAGTTAAAGCATATGTTCCAGATGTTTTGGCTCAATTCAAGAACGTAATCAAGTATGTATATAATCATGGAGGAAGGTCATTTTGGGTTCACAATACGGGTCCTGTTGGTTGTTTGCCATACATCATGGAACTTCACCCAGTAAAACCATCATTAGTGGACAAAGCAGGATGTGCAACTCCTTATAATGAAGTGGCCAAGTTCTTCAATCGTGAATTGAAAGCAGTTGTAGTTCAACTCAGAAAAGAGCTTCCCTTGGCTGCCATCACCTATGTTGATGTTTACTCGGTGAAGTACTCTCTCATTAGTCAAACAAAGAAGCACGGTTTTGAGGAACCACTGAGAGCATGTTGTGGGCATGGTGGGAAGTACAACTACAATTTACACATTGGATGTGGTGCTAAGATTAAGGTTCATGGCAAGGAGATTCTGGTGGGAAAGCCATGCAAGGATCCATCTGTTTGGGTTAATTGGGATGGTGTTCATTACACTCAGGCTGCTAACAAGTGGGTGTTTGATCAGATTGTTGATGGTTCATTTTCTGATCCACCTATTCCTTTGAACATGGCTTGTCATAAGCATCTTTAA 1179 0.4224 MNMNMNTTKSRLIITLWVVLYFCSITNSLASKSKQCHFPAMFNFGDSNSDTGGLSAAFGQAGPPHGESYFHHPAGRYCDGRLIVDFIAKKLGLPYLSAYLDSVGSNYSHGANFATAGSTIRPQNTTLHQTGGFSPFSLDVQFVQFSDFQRRTQFFRNKGGVYKTLLPKTEDFSQALYTFDIGQNDLTSGYFHNMSTDQVKAYVPDVLAQFKNVIKYVYNHGGRSFWVHNTGPVGCLPYIMELHPVKPSLVDKAGCATPYNEVAKFFNRELKAVVVQLRKELPLAAITYVDVYSVKYSLISQTKKHGFEEPLRACCGHGGKYNYNLHIGCGAKIKVHGKEILVGKPCKDPSVWVNWDGVHYTQAANKWVFDQIVDGSFSDPPIPLNMACHKHL 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02396 392 Gene3D SGNH hydrolase 27 376 IPR036514 -
Pumo5g02396 392 Pfam GDSL-like Lipase/Acylhydrolase 42 372 IPR001087 GO:0016788
Pumo5g02396 392 SUPERFAMILY SGNH hydrolase 44 373 - -
Pumo5g02396 392 CDD SGNH_plant_lipase_like 39 376 IPR035669 -
Pumo5g02396 392 FunFam GDSL esterase/lipase At1g09390 29 377 - -
Pumo5g02396 392 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 22 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02396 Pumo-Chr5 66587667 66591904 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02396 39 391 Acyl Lipid Metabolism Gene Families AT4G10950 29.781 1.36e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02396 - - gmx:100819985 780.785