LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo5g02389	ATGTTTATAAATGAAAAACAGAATCTGGTTCCACCCCAACCCCATCTCTTTGGTTCTCTATCCAAGTCCATGTCTCTAGCAGTTTCCTCACCAAAATGGCTGACCAATTGTGCTCAAGCACTCATCTCAATTCTATGTTGTGTTGTTTTCCTCTTGCTTGATTTTCTTGATGCTGTTTTCTGCGTTATCTATAGATTCCTTGATGAACGCATTGAAGGGGAGGCTTCCCCTTGCTGCTGTTCCAACCAGGAAAGGCAGAAGAGGAGGAGGATGAATGTGGCAGATGATGGTCTATCAGATAGCTTGTATGAGAGGAAGAACACTTTTAGAGAAATGGGGTTCCTTCAATTTGGGAGAGAAAGGGAAGATTCTGATAGAAAACATGGTAGGGGTGGTGGAAGGTCGGTGAACCGTTGGTCTGATTGTGGCTGTGAGTCTTGCCTTTCATGGGTGCATGATGGAAGTGACTATAAACTTCATTTTGTTGTGAAGGAGCCCTTGTTGGCCACTGGTGAGAACTTCAGGGGAAACCCTTCTGAGAATGTCATATTCTTGCATGGATTTCTCTGCTCTTCCTCATTTTGGACACAGACAGTGTTTCCATGTTTTTCTGAAAAAGTGAATCAAAAGTACAGATTGATTGCCATTGACCTGCTGGGATTTGGAAAGAGTCCAAAGCCTAGAGATTGCTCATACACTTTGAAGGATCATGTGGAAATGATTGAGAAATCTGTGATTGAACCATTGGAGTTAAGTAGTTTTCATTTGGTTGCACACTCCATGGGTTGCATAATTGCATTGGCCTTGGCTGCAAAGTACCCCAAGTGTGTAAAATCAATCACCCTTGTTGCTCCTCCATACACTTCTTCTGAGGGAAATGATGCTTGTCTAAATGCACTATCAATGGTTGCTGGAAAGAAATTGTGGTCCCCATTGTCATTTGGTTCTTCATTTATGTCATGGTATGAGCACTTGGGTCGTACTGTTTGCCTTGTCTATTGCAGAAATCACAGGATATGGGAGAGCATCCTAAAATTCATTAATCGCAAGAGGGATCTTCATTTCTTAACCATAGACTTGACCAGGCACACCCATCATTCAGCTTGGTGTACCATGCACAATGTAATATGTGGAGGAGCAAAATTTGTGGATAGTTATCTAACGATTTTGACCAAAGTTGGAGTCAGAATAAATGTGATTCAAGGTGATAAAGATCAGGTTGTCCCAATGGAGTGTTGTAGTAAGTTCAAGTTGAAGGCTCCTAATGCTGAAATCACCATCATTCCAAATGCAAACCACGGCACTGTACTATTTGGCAGAAAGAAGGAATTTGCATATAGTTTGGAGCATATATGGGAATCTTGCTGTTGA	1371	0.4179	MFINEKQNLVPPQPHLFGSLSKSMSLAVSSPKWLTNCAQALISILCCVVFLLLDFLDAVFCVIYRFLDERIEGEASPCCCSNQERQKRRRMNVADDGLSDSLYERKNTFREMGFLQFGREREDSDRKHGRGGGRSVNRWSDCGCESCLSWVHDGSDYKLHFVVKEPLLATGENFRGNPSENVIFLHGFLCSSSFWTQTVFPCFSEKVNQKYRLIAIDLLGFGKSPKPRDCSYTLKDHVEMIEKSVIEPLELSSFHLVAHSMGCIIALALAAKYPKCVKSITLVAPPYTSSEGNDACLNALSMVAGKKLWSPLSFGSSFMSWYEHLGRTVCLVYCRNHRIWESILKFINRKRDLHFLTIDLTRHTHHSAWCTMHNVICGGAKFVDSYLTILTKVGVRINVIQGDKDQVVPMECCSKFKLKAPNAEITIIPNANHGTVLFGRKKEFAYSLEHIWESCC	456

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo5g02389	456	PANTHER	HYDROLASE	155	445	-	-
	Pumo5g02389	456	PRINTS	Alpha/beta hydrolase fold signature	256	269	IPR000073	-
	Pumo5g02389	456	PRINTS	Alpha/beta hydrolase fold signature	270	283	IPR000073	-
	Pumo5g02389	456	PRINTS	Alpha/beta hydrolase fold signature	210	225	IPR000073	-
	Pumo5g02389	456	Pfam	alpha/beta hydrolase fold	182	287	IPR000073	-
	Pumo5g02389	456	Gene3D	alpha/beta hydrolase	151	454	IPR029058	-
	Pumo5g02389	456	SUPERFAMILY	alpha/beta-Hydrolases	176	435	IPR029058	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo5g02389	Pumo-Chr5	66502893	66507276	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo5g02389	38	455	Acyl Lipid Metabolism Gene Families	AT5G17780	50.356	2.36e-144	417

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo5g02389	-		-	gmx:100775258	817.764

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pumo5g02389	5	66502893	66507276	Pumo5g02389	5	66502893	66507276	ECH