Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02363 ATGGGTGTTTCGGTTGATTCACCATCACAAAAGGGTTCATGGGATTCCTTGAAGTTTTTAACTAGGAGGAAGCAGGTTGATTCTCCACGAAGGAACTCTCAGCCTCTGCTTGCCAAGGAGTTAACTGTGCCTCATCTCATTGCAGTTGGTGTTGGTTCAACAATTGGTGCTGGAGTGTATGTTCTGGTGGGAGCGGTTGCACGGGAGCATGCTGGACCCGCTTTGGCCATTTCTTTTCTGATTGCTGGATTAGCTGCTGGTCTTTCTGCTTTTTGCTATGCAGAGTTGGCTAGTCGCTGCCCTTCTGCTGGGAGTGCATATCATTATTCATACATTTGTCTTGGGGAAGGTGTTGCTTGGTTGATTGGCTGGTCTTTGTTATTGGAATATACAATTGGTAGTGCTGCAGTTGCTCGTGGCATAACCCCCAATTTGGCTGCACTTTTTGGTGGTGCGGAGAATTTACCAATATTTTTGGCGCGGCAGCGTATTCCTGGAATAGATGTTGTTGTGGACCCATGTGCAGCAATCTTGGTATTACTTGTTACCGGACTCTTATGTGTGGGGATCAAGGAGAGCACAGTGGTACAAGGCATAGTGACAGCAGTGAATGTATGTGCATTGCTTTTTGTAATAGCAGCTGGTGGTTACTTGGGATTCAAGTCTGGATGGGTTGGATATGAACTTTCTATGGGGTTTTTTCCCTTTGGGATTAATGGGATGCTGGCTGGGTCTGCAACAGTATTCTTTGCATATATAGGTTTTGATGCAGTTGCCAGCACTGCTGAAGAGGTAGTTAAAAATCCTCAACGAGATTTACCCCTTGGCATTGGTGGTGCACTGTTTATTTGTTGTGGGATCTATATGATGGTGTCCATTGTTGTAGTTGGTTTAGTACCTTATTATGCAATTGATCCAGATACCCCAATATCATCTGCATTTGCTGATCAAGGGATGCAATGGGCAGCTTATATTATAAATGCTGGTGCTTTCACAGCTCTCTGCTCAGCATTGTTGGGTGGGATACTTCCCCAGCCACGAATTTTAATGTCTATGGCAAGGGATGGACTGCTGCCACCTTTTTTTTGTGATATAAATAAGCAGACTCGGGTTCCTGTTAAGAGCACAATAGCTACTGGTGTTGTGGCTGCAATCTTGGCATTTTCTATGGAAGTCTCTGAACTAGCAGGAATGGTTAGTGTGGGTACGCTTTTAGCATTCACCATGGTGGCAACGTCTGTGTTGATCCTAAGATATATCCCTCCAGATGAAGTCCCATTGCCTCCATCACTCCAGGATTCAATTGCTTCAGTGTTAAAGCGGTGTAATTTGAGCAATACAGAGACAAATGTGGGCTATGCAGATGCAAATATTGGAACTTCTGAGTACAGAAAACCTTTAATTGTTAAGGAGGATGTTTCAATTGATTTTCCTAAACATCTTGCTCGAAGAGTTGTTGGGTGGATCATAGCATTCATATGCTTAGGGGCGTTTGTCCTTACATATGCTGCTTCAGATTTTACTCTTCTTAGTTCTGTTCGCTTCGCATTATGTGGAGTTGGCGGTGCTATTCTTTTGTGTGGTTTTGTTTTCCTAACATGTATAAATCAAGATGATGCAAGACATAACTTTGGGCACACTGGAGGTTTCATTTGCCCATTTGTGCCACTGCTTCCCATAGCTTGCATTCTCATCAATTCCTACTTACTTGTTAATCTTGGATATGGTACATGGTTGCGTGTTTCTATATGGCTGGCAACAGGACTACTAGTTTATGTGTTCTATGGCCGAACGCATAGCTCTCTAAAAGATGCAATTTATGTGCCAGCAAAGCAAGTGGATGAAATTTACCAGACTTACAGAAGCTGTCTTGCTTAA 1878 0.434 MGVSVDSPSQKGSWDSLKFLTRRKQVDSPRRNSQPLLAKELTVPHLIAVGVGSTIGAGVYVLVGAVAREHAGPALAISFLIAGLAAGLSAFCYAELASRCPSAGSAYHYSYICLGEGVAWLIGWSLLLEYTIGSAAVARGITPNLAALFGGAENLPIFLARQRIPGIDVVVDPCAAILVLLVTGLLCVGIKESTVVQGIVTAVNVCALLFVIAAGGYLGFKSGWVGYELSMGFFPFGINGMLAGSATVFFAYIGFDAVASTAEEVVKNPQRDLPLGIGGALFICCGIYMMVSIVVVGLVPYYAIDPDTPISSAFADQGMQWAAYIINAGAFTALCSALLGGILPQPRILMSMARDGLLPPFFCDINKQTRVPVKSTIATGVVAAILAFSMEVSELAGMVSVGTLLAFTMVATSVLILRYIPPDEVPLPPSLQDSIASVLKRCNLSNTETNVGYADANIGTSEYRKPLIVKEDVSIDFPKHLARRVVGWIIAFICLGAFVLTYAASDFTLLSSVRFALCGVGGAILLCGFVFLTCINQDDARHNFGHTGGFICPFVPLLPIACILINSYLLVNLGYGTWLRVSIWLATGLLVYVFYGRTHSSLKDAIYVPAKQVDEIYQTYRSCLA 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02363 625 Gene3D Amino acid/polyamine transporter I 37 439 - -
Pumo5g02363 625 PIRSF AA_transporter 18 427 - -
Pumo5g02363 625 PIRSF AA_transporter 473 614 - -
Pumo5g02363 625 Pfam Amino acid permease 45 424 IPR002293 GO:0016020|GO:0022857|GO:0055085
Pumo5g02363 625 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 21 601 - -
Pumo5g02363 625 Pfam C-terminus of AA_permease 550 600 IPR029485 -
Pumo5g02363 625 FunFam probable cationic amino acid transporter 37 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02363 Pumo-Chr5 65918834 65926162 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02363 17 625 Organic Solute Cotransporters AT5G36940 63.898 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02363 K13863 - gmx:100784895 1140.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02363 5 65918834 65926162 Pumo5g02363 5 65918834 65926162 ECH