Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02259 ATGACTAGTAAAAAAGCATTACCTGTTCCAACCTTTGTTAGTGGCTTTTGTTTCAGTTACCATAGTTCCCAAAGAAAGATGAGAGTTCCGGAGTTATCACCCTCTGATGGCAATGGTTCCTCTACTAATGAAGATGAACCTTTACCTCAGGATGCAGATTATAGTAATGTTCTGAGTCTTAGTGATGAGTTAGAGACTTCAATCTTGGCAAGATTTCCAAGATCACAGCACTGGAAATTGTGCTTTCTCAACAAGAGGTTTTTGTCTCTAGCAAAGAGTGGTGAGATCTACAAAATAAGGAGAGAGTTAGGATTCAAAGAACCTTCAGTGTTCATGCTGGCAAGTGGGGAGAGCAATTGGTGGGGAATGGAGTGGCCTTTCAACTCAAGCAAGAAGCTCCCTCCTATTCAATCAGATTATAGTTTTGAGTATGGAGATAAGGAGTCATTTTGTGCAGGGTCCCACCTATTAGTCTCAGGCAAGGAGATTGATGGGGCTGTTATTTGGAGGTTTGATTCAATGAAAAATGAATGGCTCAAAGGGCCATCTATGATCAACCCAAGGTGTCTTTTTGCATCAGCCACATGTGGCCCCATTGCTTTTGTTGCTGGGGGTCTTGATGCAAGTACTTACAGCCAAGTCTTGGATTCTGCTGAGAAGTACAATTCTGAAAGCCAGTGTTGGGAGCCCCTCCCAAGGATGAACAAGAAGAGGAAGTTTTGCTCAGGTTGTTTCATGGACAACAGGTTCTATGTCCTTGGAGGGCAAGATGAGCATGGGAAGGACCTCACTTGTGGGGAATTCTTTGATGGGAAAACAAACAGTTGGAACTTGATTCCTGGCATGTGGAGGGATATTCCTCTTTTTGTTTCACAGTCTCCACCTCTTCTTGCTGTTGTGAATAATGAGTTGTACACACTGGATGCTTCTTCCAATGAGCTGAAAGTGTACATGAAGGGAATCAATTCATGGAAGACTTTGGGAGTGGTTCCTGTGAGAGCTGATGCACAAAGAGGTTGGGGTGTGGCATTTAAATCTCTAAGTGATGAGTTACTTGTTATTGGTGCACCTTCTGTGTCACACACAGTGAATGCCTTGTCTATGTACACCTGCTGCCCTGATCCAGATGATGAGAAATTGAGGTGGAGGCAAATTGGATGTGGCAGCATTCAGCTCAATCACTTCATCCGAAATTGTGCTGTGATGGGGACCTGA 1215 0.4379 MTSKKALPVPTFVSGFCFSYHSSQRKMRVPELSPSDGNGSSTNEDEPLPQDADYSNVLSLSDELETSILARFPRSQHWKLCFLNKRFLSLAKSGEIYKIRRELGFKEPSVFMLASGESNWWGMEWPFNSSKKLPPIQSDYSFEYGDKESFCAGSHLLVSGKEIDGAVIWRFDSMKNEWLKGPSMINPRCLFASATCGPIAFVAGGLDASTYSQVLDSAEKYNSESQCWEPLPRMNKKRKFCSGCFMDNRFYVLGGQDEHGKDLTCGEFFDGKTNSWNLIPGMWRDIPLFVSQSPPLLAVVNNELYTLDASSNELKVYMKGINSWKTLGVVPVRADAQRGWGVAFKSLSDELLVIGAPSVSHTVNALSMYTCCPDPDDEKLRWRQIGCGSIQLNHFIRNCAVMGT 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02259 404 Pfam Kelch motif 187 235 IPR006652 GO:0005515
Pumo5g02259 404 Pfam Kelch motif 238 282 IPR006652 GO:0005515
Pumo5g02259 404 MobiDBLite consensus disorder prediction 28 52 - -
Pumo5g02259 404 SUPERFAMILY Kelch motif 149 371 IPR015915 GO:0005515
Pumo5g02259 404 Gene3D - 96 386 IPR015915 GO:0005515
Pumo5g02259 404 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 52 403 - -
Pumo5g02259 404 SMART kelc_smart 199 248 IPR006652 GO:0005515
Pumo5g02259 404 SMART kelc_smart 155 198 IPR006652 GO:0005515
Pumo5g02259 404 FunFam F-box/kelch-repeat protein SKIP11 102 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02259 Pumo-Chr5 60662159 60664864 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02259 58 279 Miscellaneous Gene Families AT4G33900 27.193 3.31e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02259 - - gmx:100777338 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02259 5 60662159 60664864 Pumo5g02259 5 60662159 60664864 ECH