Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02213 ATGCATTACCAAGCAGCGGCGGCGTCGTGGGGGAGCTACGTGGCCCCGGCGAGGAACGCGGTGGTGGTGGGGGACCCGCTGGAGCGCGTTGAGAGGCTGGCGTCGGAGAGCGCGGTGGTGATATTCAGCGTGAGCACGTGCTGCATGTGCCACGCCATCAAGAGGCTCTTCTGCGGCATGGGTGTGAACCCGACCGTGCACGAGCTGGACGAGGATCCCCGAGGCAAGGACCTCGAGCGAGCCCTCATGCGCCTCCTAGGAACTCCCTCGGTCGTCCCTGTCGTCTTCATCGGAGGCAAGCTTGTCGGAACCATGGACCGCGTCATGGCCTGCCACATCAACGGCACCCTCGTCCCTCTCCTCAAAGAAGCCGGTGCTCTCTGGCTCTGA 390 0.6487 MHYQAAAASWGSYVAPARNAVVVGDPLERVERLASESAVVIFSVSTCCMCHAIKRLFCGMGVNPTVHELDEDPRGKDLERALMRLLGTPSVVPVVFIGGKLVGTMDRVMACHINGTLVPLLKEAGALWL 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02213 129 NCBIfam glutaredoxin-like family 30 129 IPR011905 -
Pumo5g02213 129 FunFam Glutaredoxin family protein 27 128 - -
Pumo5g02213 129 SUPERFAMILY Thioredoxin-like 27 128 IPR036249 -
Pumo5g02213 129 Pfam Glutaredoxin 39 102 IPR002109 -
Pumo5g02213 129 Gene3D Glutaredoxin 25 128 - -
Pumo5g02213 129 ProSiteProfiles Glutaredoxin domain profile. 27 128 - -
Pumo5g02213 129 CDD GRX_GRXh_1_2_like 38 120 - -
Pumo5g02213 129 PANTHER GLUTAREDOXIN 28 129 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02213 Pumo-Chr5 59471889 59472754 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02213 1 129 Miscellaneous Gene Families AT3G02000 63.043 2.20e-50 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02213 K03676 - gmx:100808865 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02213 5 59471889 59472754 Pumo5g02213 5 59471889 59472754 ECH