Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02212 ATGGGAAGCACATTTAATCCGCAGATTTTAGTGGAAAAACTAGCCAAGCTGAATGTTTCACAAACGAGCATAGAGACTCTGTCACATTGGTGCATTTTTCATATGAACAAAGCCAAACAAGTTGTTGAAACGTGGGATAGACAATTTCATAGTTCTTCACGTGAGAAGAGATTGGCATTTCTGTATCTTGCAAATGATATTTTACAGAACAGCAGGCGAAAGGGTTCTGAATTTGTAGGTGAATTCTGGAAGGTTCTTCCAGATGCTCTTCGAGATGTGATTCAAAATGGAGATGACTTTGCAAGGAATGCAGCGCTTCGGCCTGATTGGTATATGGGAAGAGAGGAAAGTTTTTGGTTCTCGCGGTCAAATTCTAAGGAAGAGTTTGTTGGGAGGCATGTGGAAAATAATAGCCGAGATGTGAAACCTACAAACATGAAACTGAGGCCATCTGCGGGGAATGCATTGGAGAAAATAGTTTCAGGTTTTCATGTTGTTTATGGAGGGCAAACAGATGAAGACGCCGTATTGAGCAAATGCAGGAATGCCATTAACTGTCTTGATAAAGCAGATAAGGAAATAGTTTCAGGGCAATTCAATGGATCTGCACTAGTGGATGAGCTCCAGGGGCATAATGCCGTACTGAAGGACTGCATCGAACAATTAACAGCCATAGAGTCATCAAGAACTAGTCTTGTGTCTCACTTGAGAGAAGCTCTCGAGGATCAGGAATTCAAGCTGGGTCAAGTCCGTAGCCAGATTCAGGCTGCACATGTTCAGTCTGAACGGGCAACTAACAACTGCCAACAATTACTAAATGGCAACAACATTCAGTCATTAGCTGAGCAGAGCTCAAAGGAAATTCAAACCTCCATGACACCTGCAAGTTTTAACATTTCTAGTGAAAGGGAGCAATCAGCTCCATTAATGTACACTCCACAAGTGTCATTTTCTCAAAAATCTGGACACATTGAGGAAGATCCACGCAAGTCTGCAGCTGCTGCAGTGGCAGCAAAACTGACTGCTTCAACATCCTCCGCGCAGATGCTATCTTATGTGCTGTCCTCGCTAGCATCAGAAGGCGTGATAGGCAATCCAATGAAAGAATCTTCAGCAGATTATCACTCTGAGAAGAGGACCAAGCTCGAGAATGACCAGCCACCTTTTATACCATCTCAGAATCCTCAACAACCACTTCCTCCCTTTCCACTTTCCGAGTCTATTCAACACAATGCACCTACAACCAACCAGCAACCTACTCCCAATGAACCACCACCTCCACCCTCATCATCACCTCCCCCATTGCCGCCACCACCACCGCCAATGTCACAGTACCCTGTGCCGCAGTTTATGCAGACTGCTGGATCCATTAATAGTATGGCTATGGCATACAGCTATGGCATGACACAACAGCCATCAATGGCTGCCTATCCAGGTGTTGGGGCTTCCCTGAATGGTGTTTCTACTTTTACCCCTCCTCCAATGGGTACATATCAGGGTTTTCAGGGTTCAGATGGAAATTACTATAATCAGCCCTCATCAATGCCTATGGCCCCAATATCTCGACAATAA 1572 0.4466 MGSTFNPQILVEKLAKLNVSQTSIETLSHWCIFHMNKAKQVVETWDRQFHSSSREKRLAFLYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIQNGDDFARNAALRPDWYMGREESFWFSRSNSKEEFVGRHVENNSRDVKPTNMKLRPSAGNALEKIVSGFHVVYGGQTDEDAVLSKCRNAINCLDKADKEIVSGQFNGSALVDELQGHNAVLKDCIEQLTAIESSRTSLVSHLREALEDQEFKLGQVRSQIQAAHVQSERATNNCQQLLNGNNIQSLAEQSSKEIQTSMTPASFNISSEREQSAPLMYTPQVSFSQKSGHIEEDPRKSAAAAVAAKLTASTSSAQMLSYVLSSLASEGVIGNPMKESSADYHSEKRTKLENDQPPFIPSQNPQQPLPPFPLSESIQHNAPTTNQQPTPNEPPPPPSSSPPPLPPPPPPMSQYPVPQFMQTAGSINSMAMAYSYGMTQQPSMAAYPGVGASLNGVSTFTPPPMGTYQGFQGSDGNYYNQPSSMPMAPISRQ 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02212 523 SMART 558neu5 9 124 IPR006569 -
Pumo5g02212 523 Pfam CID domain 9 99 IPR006569 -
Pumo5g02212 523 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 1 494 - -
Pumo5g02212 523 MobiDBLite consensus disorder prediction 363 448 - -
Pumo5g02212 523 MobiDBLite consensus disorder prediction 403 417 - -
Pumo5g02212 523 MobiDBLite consensus disorder prediction 418 446 - -
Pumo5g02212 523 MobiDBLite consensus disorder prediction 496 523 - -
Pumo5g02212 523 SUPERFAMILY ENTH/VHS domain 13 105 IPR008942 -
Pumo5g02212 523 ProSiteProfiles CID domain profile. 2 188 IPR006569 -
Pumo5g02212 523 CDD CID_RPRD_like 7 107 - -
Pumo5g02212 523 Gene3D - 2 108 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02212 Pumo-Chr5 59440092 59453788 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02212 K15559 - gmx:100806108 852.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02212 5 59440092 59453788 Pumo5g02212 5 59440092 59453788 ECH