Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02183 ATGGCTGACGCCAAAGATTCCTCCATATTAGACTCCAAATCCAAATCTTCCCCAACCTCAACCTCAATCTTAACAACCTCAGACTCACAACAACATAGGACTATGATGAGTTTCTTGATGGCTCAGGACATCCTCAGAATCCTACCCACTCTCCTCTCCGCTGCATCAATCGCAGTCATGGTCACCAACAACCAAACCGTTCTCGTCTTCGCTATCCGCTTCGAAGCCCACTTTTATTACTCTCCCTCCTTCAAGTTTTTTGTAGCAGCAAATGGTGTAGTCGCTGCCTTCTCTTTGCTGACACTGATAATGAACTTTCTGATGAAACATCAAGCATCACCAAGATACCATTTCTTTCTATTCGTGCATGACATAGTGATGACAGTGTTGTTGATAGCTGGATGTGCAGCGGCAACTGCAATAGGGTACGTGGGGCAGTATGGAGAGGAGCATGTGGGTTGGCAGCCAATTTGTGACCATGTGCGCAAGTTCTGCACAACAAACTCGGTTTCCCTTTTGCTCTCTTTTTTTGCTTTCATTGCCTATTTCGGACTCACTCTTTTATCAGCCTACAAATGCGTCTCTTCTTCTCCCAAGAATTAA 603 0.4511 MADAKDSSILDSKSKSSPTSTSILTTSDSQQHRTMMSFLMAQDILRILPTLLSAASIAVMVTNNQTVLVFAIRFEAHFYYSPSFKFFVAANGVVAAFSLLTLIMNFLMKHQASPRYHFFLFVHDIVMTVLLIAGCAAATAIGYVGQYGEEHVGWQPICDHVRKFCTTNSVSLLLSFFAFIAYFGLTLLSAYKCVSSSPKN 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02183 200 PANTHER CASP-LIKE PROTEIN 4A4 27 193 - -
Pumo5g02183 200 MobiDBLite consensus disorder prediction 11 28 - -
Pumo5g02183 200 NCBIfam plant integral membrane protein TIGR01569 44 192 IPR006459 -
Pumo5g02183 200 MobiDBLite consensus disorder prediction 1 28 - -
Pumo5g02183 200 Pfam Casparian strip membrane protein domain 40 181 IPR006702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02183 Pumo-Chr5 58869909 58872119 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02183 - - gmx:102659722 306.219