Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02182 ATGGGGTGCACTTACTCTGTGTATAGGAAGAAAAAATCAACCTTTCCTGAAGTGGTGGTCTTTGTTCCATCAACAAGAATTCCAGTGCAATCTGATCTTCAAAGGGTGCTTAAGGGAGTAGTTCCAAGGGATCTTGCTGATAAATTGACTTCACTGAGGAATCAGATAGTGTTGGTAGCAGAAGATACTGGTGGGTCAGCTATAGCTGAATTGCGGCGAGCTTTGAATGAATATTTGTCTGTTCTGATTGGACTTACTAAGAAAGAGTATGGTCTTGAAGGACTAATAGATTTCAAGTGGAAAAATTTAGAAGATGGGAAACAAGATAGCAGTATATCAAATACCTGGTTTGAGGTGCTATCCTCAGTTCACCTTATGGCTATGCTGACACTGTCTGAGGCTGACTCACTGATGATTCCAAAGGACCCCTCAGGGTCTGGATTCAGGGTTGTATCTTCAGATAGCAAGAGGGAAGCAATTGATTTGCTACTAAAGGCATCAGGATACCTGGAGTTCTGTCTAAGGGATATTCTTACTCGGATACCTGCTGAAACCAAGAAAACTTTTCCCCACGACTTGCAGGAGGGTGTATTGGAGGCTACTGCTATTCAAACATTAGGCCAGGGAACTGAGATTCAACTTGGTCTTGCGGTGGAAAGTCAGAAGGCAACTTTGTCTGTGAAGAGGAGGTTGGCATGTGAACAGCTGATTTACTTTAGTCAGGCTTATCACTGCTTGTCAGGATGCGATATCAACCAAGGGCATGGAAGGAAGCATATTCGATTTATCAAATGGAAATTCCTTGAAGCCAAGGCTGCAGCCTACTACTACCATGGTCTGATCCTTGATAAGGGTAGTGAACCAAGCAGTCACATTGGTGCCGTGTCTTGTTTTCTTGCTGCAGAAGAACTTCTGGCTGAAAGCAAGAAGGCATGCTTAAGCTTCTGTCTTGCAGCTCCAGTGACAAGGGCTCCTCCACTCTGGGGTGCTATGAAATTTTTACACCAGAAAATTCCTGAAGTTGCATCAAGGAAGTCCCAGATGTATGGCTACCTCTGGGAGCAAGAGAAGGGTCTTCAATCATTGCCAGACCTTCCTGAATTCCAATTATCATTACGTCCAGATGACTATGAACTGCCTGAAATTGATCCAGCATGGGATAGTAAAAACTGGGAATCTCTAGGGCAGCCATTGAAGGAGCACCTTAGAGATAGTGATGAGACTGATGAGAATCCCACTGATTGA 1245 0.4402 MGCTYSVYRKKKSTFPEVVVFVPSTRIPVQSDLQRVLKGVVPRDLADKLTSLRNQIVLVAEDTGGSAIAELRRALNEYLSVLIGLTKKEYGLEGLIDFKWKNLEDGKQDSSISNTWFEVLSSVHLMAMLTLSEADSLMIPKDPSGSGFRVVSSDSKREAIDLLLKASGYLEFCLRDILTRIPAETKKTFPHDLQEGVLEATAIQTLGQGTEIQLGLAVESQKATLSVKRRLACEQLIYFSQAYHCLSGCDINQGHGRKHIRFIKWKFLEAKAAAYYYHGLILDKGSEPSSHIGAVSCFLAAEELLAESKKACLSFCLAAPVTRAPPLWGAMKFLHQKIPEVASRKSQMYGYLWEQEKGLQSLPDLPEFQLSLRPDDYELPEIDPAWDSKNWESLGQPLKEHLRDSDETDENPTD 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02182 414 Gene3D alix/aip1 like domains 29 395 IPR038499 -
Pumo5g02182 414 PANTHER UNCHARACTERIZED 1 393 IPR038898 -
Pumo5g02182 414 CDD BRO1_Alix_like 11 375 - -
Pumo5g02182 414 ProSiteProfiles BRO1 domain profile. 5 414 IPR004328 -
Pumo5g02182 414 SMART BRO1_2 19 382 IPR004328 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02182 Pumo-Chr5 58855971 58860186 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02182 - - gmx:100786306 797.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02182 5 58855971 58860186 Pumo5g02182 5 58855971 58860186 ECH