Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02180 ATGGCGGATCCAATCGCGAAGGCTCTGATCGCGTTTGCGCTCATAGCTTCTTCCCTGTTGCTGTGCTCGCACGCTTCCTCCGACGTCCCCTTCATCGTCGCTCACAAGAAGGCCTCCCTCAACAGACTCAAGTCCGGCGCCGAAAGGGTCTCCGTCACCATCGACATCTACAACCAAGGAACCTCGACGGCCTATGATGTAAGTTTAGCCGACGATAGCTGGCCAAGTGATACTTTTGATGTAATCAGCGGTAGCACTTCTAAGTCATGGGAAAGGCTTGATGCTGGTGGCATCCTTTCTCACACATTTGAGTTGGAGGCAAAAGCAAAGGGAGTATTTGCTGGTGAACCAGCTGTCATAAAGTTCCGTGTTCCCACAAAGGCTGCTTTGCAGGAGGCATATACAACTCCCATATTGCCTTTGGATGTTCTTGCTGACAGACCTCCTGAGAAGAAGTTTGAATTGGTATATTTCCTGTATACTTGA 486 0.4979 MADPIAKALIAFALIASSLLLCSHASSDVPFIVAHKKASLNRLKSGAERVSVTIDIYNQGTSTAYDVSLADDSWPSDTFDVISGSTSKSWERLDAGGILSHTFELEAKAKGVFAGEPAVIKFRVPTKAALQEAYTTPILPLDVLADRPPEKKFELVYFLYT 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02180 161 PANTHER TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR TRAP-BETA SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT 7 156 - -
Pumo5g02180 161 Pfam Translocon-associated protein beta (TRAPB) 19 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02180 Pumo-Chr5 58836773 58839759 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02180 K13250 - gmx:100500066 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02180 5 58836773 58839759 Pumo5g02180 5 58836773 58839759 ECH