Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02179 ATGAATACCAACAACAACAACCAAAAAAACCAATCGTTTCCAGAAGCACAAGGAGCAGCATCTTCATCATCATCTTCTCCACCGAACGTTGGCAATGAGAATTGGGGAACTCACATAATGGGCACCCCCGCTATTCCAAGCAGCCACCCAGATAACAAAAAAGCAGCTTTACAAAGCGGACAACCTCAACCAGTTCAATACTACCATCATGATCATCCCTACGTGCAACACAGCCCCGTTGAGAAACCAAGCAACAGTCCCATGGAGTCAATCCTCAACATGTTCGATTCATGGAGCAAAAAGGCTGAAGCCACCGCACACAACGTCTGGCACAATCTTAAAACTGGTCCATCAGTGTCTTCAGCTGCACTGGGGAAGATGAATCTGACGGTGAAAGCGATATCAGAGGGTGGATTTGAGCCCCTTTACAAGCAAACATTCACAACCTATCCAAACGAGAAGCTCAAGAAGAGCTTTGCTTGTTACCTTTCAACATCAACAGGTCCTGTTGCAGGAACCCTTTACCTGTCCAATATTCATGTAGCGTTTTGCAGCGATCGCCCATTGTGTTTCACTGCACCCTCTGGCCAGGAAACTTGGACATACTACAAGGTAATGGTGCCTCTGGGGAAGGTTGGAGTTGTCAACCCAGTGACCATGAGGGAGAACCCATCAGAGAAGTACATTCAGATTGTAACGGTGGATGGGCATGATTTTTGGTTCATGGGTTTTGTTAATTTTGACAAAGCAGTTAAGAACCTCTCGGAAGGTATCTCACATTTTGTAGCACCAGGAGTGGCCGTGCCAGTGCCAGTGCCAGTGCCATCCACTAGTTCGGGAGCTAATGGAAAGAACTTTCAGTGA 864 0.4688 MNTNNNNQKNQSFPEAQGAASSSSSSPPNVGNENWGTHIMGTPAIPSSHPDNKKAALQSGQPQPVQYYHHDHPYVQHSPVEKPSNSPMESILNMFDSWSKKAEATAHNVWHNLKTGPSVSSAALGKMNLTVKAISEGGFEPLYKQTFTTYPNEKLKKSFACYLSTSTGPVAGTLYLSNIHVAFCSDRPLCFTAPSGQETWTYYKVMVPLGKVGVVNPVTMRENPSEKYIQIVTVDGHDFWFMGFVNFDKAVKNLSEGISHFVAPGVAVPVPVPVPSTSSGANGKNFQ 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02179 287 Gene3D - 140 259 IPR011993 -
Pumo5g02179 287 MobiDBLite consensus disorder prediction 1 68 - -
Pumo5g02179 287 MobiDBLite consensus disorder prediction 1 36 - -
Pumo5g02179 287 PANTHER GEM-LIKE PROTEIN 2 39 260 IPR037848 -
Pumo5g02179 287 CDD PH-GRAM_GEM 152 260 - -
Pumo5g02179 287 SMART gram2001c 141 219 IPR004182 -
Pumo5g02179 287 Pfam GRAM domain 144 253 IPR004182 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02179 Pumo-Chr5 58831099 58833928 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02179 - - gmx:100811963 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02179 5 58831099 58833928 Pumo5g02179 5 58831099 58833928 ECH