Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02133 ATGCTTAGAACATTAGCCAGGGAGTTCAAGCGAACCAACCTTACCAATGATTTGCTTCAAAAACGCAGCAGATTCTATGCAACTACGGTTGGTGGAAGAAGCAGGTTAGAGGGAAAAGTGGCACTCATAACAGGATCAGCAAGTGGACTCGGCAAGGCCACGGCCCATGAGTTTGTCCAGCATGGGGCCCAAGTAATCATTGCTGACAATGACACCGAGCTTGGCCCACAGGTTGCTAAGGAGTTGGGCCCATTGGCCTGCTACGTGGACTGTGATGTTACTGTTGAGGCCCAAGTGGCGGAAGCCGTGAATGTTGCGGTGGCCCACTACGGCAAGCTGGACATCATGTACAACAATGCCGGCATCACAGGCCCAACAATTCCACCTAGCATAGTAGGACCTAGACCTTGA 411 0.5182 MLRTLAREFKRTNLTNDLLQKRSRFYATTVGGRSRLEGKVALITGSASGLGKATAHEFVQHGAQVIIADNDTELGPQVAKELGPLACYVDCDVTVEAQVAEAVNVAVAHYGKLDIMYNNAGITGPTIPPSIVGPRP 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02133 136 Gene3D - 28 131 - -
Pumo5g02133 136 PRINTS Glucose/ribitol dehydrogenase family signature 40 57 IPR002347 -
Pumo5g02133 136 PRINTS Glucose/ribitol dehydrogenase family signature 111 122 IPR002347 -
Pumo5g02133 136 Pfam short chain dehydrogenase 39 124 IPR002347 -
Pumo5g02133 136 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 35 125 IPR036291 -
Pumo5g02133 136 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 33 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02133 Pumo-Chr5 57954854 57957480 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02133 36 124 Acyl Lipid Metabolism Gene Families AT1G63380 31.250 1.02e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02133 - - gmx:100808525 216.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02133 5 57954854 57957480 Pumo5g02133 5 57954854 57957480 ECH