Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02119 ATGGTGTACAACACTTCCCAGGGCATAGTCCCTGGGAAGCTCAATGTTCATCTGGTAGCTCACACCCACGATGATGTTGGTTGGTTGAAGACCGTTGATCAGTACTATGTTGGCTCTAACAATTCAATTCAGGGGGCTTGTGTGCAAAATGTGTTGGACTCCATGGTGCATGCTCTTTTGGCTGACAAGAACAGAAAATTTATCTATGTTGAGATGGCCTTTTTCAAGCGATGGTGGAGAGATCAAAGTGAAGCTGTTCAGGATGTAGTTAAAAAACTCGTTAGTTCGGGTCAACTAGAGTTCATAAATGGTGCCATGGCTATGCATGATGAGGCAGTAACACATTACATAGACATGATTGATCAGACTGCACTTGGACATCAATTTCTAAAAGAGGAATTCGGTGTGACTCCTAGAATTGGTTGGCAAATTGATCCTTTTGGACATTCTGCTGTGCAGGCTTACCTGTTGGGAGCTGAAGTTGGCTTTGACTCATTTTTCTTTGGTCGGATAGATTACCAAGATAGGGCTAAGCGCAAAAAGGAAAAGAGTCTTGAGGTTATCTGGCAGGGTAGCAAGAGCCTTGGCTCCTCTGCCCAGATCTTTGCTGGAGCATTCCCTGAAAATTATGAGCCACCTTCAGGATTTTACTTTGAAGTTAATGATGTCTCACCAATAGTTCAAGATGACATGGAATTGTTTGATTACAATGTCCAAGATCGAGTGAATGACTTTGTTGCTGCTGCATTATCACAGGCAAACATAACTCGAACAAATCACATAATGTGGACAATGGGAACTGATTTTAAGTATCAATATGCACATACATGGTTCCGACAGCTGGACAAGCTTATTCATTATGTAAACATGGATGGACGTGTCAATGCTCTGTACTCTACACCATCCATATATACTGATGCAAAATATGCTACAAATGAGTCCTGGCCAATCAAGACGCATGATTTCTTCCCTTATGCAGATCGTGCAAATGCTTACTGGACAGGATACTTTACCAGTAGGCCAGCTATCAAACGCTATGTCAGATTAATGAGTGGCTATTATTTGGCTGCAAGACAACTAGAATTTTTTAGGGGGAGAATGAATTCAGGGCCAAATACAGACTCATTAGCTGATGCTTTAGCAATTGTGCAACACCATGATGCAGTCACTGGCACAGAAAAGCAGCATGTGGCTAATGATTATTCTAAACGATTGTCAATAGGCTACAAGAAGGCAGAGGAATTGGTTTCATCATCACTGGCTTGCTTGGTTGAGTCACCGTTGCTTACTAGATGTCAAAACCCAGTTACAAAGTTTCAACAATGTCCACTTTTGAACATAAGTTACTGTCCTGCATCAGAAGTTGATCTGGTTCAAGGAAAGAATTTGGTTATTGTGGTTTACAACTCTCTAGGTTGGAGGAGGAATGAAGTGATTCGGATTCCAGTTAATGAGGCCAATGTTAGAGTTCATGACTCTAATGGTATAGAAATAGAATCTCAACTTCTTCCTCAGGCTGAAAAATATGTAGACTTAAGAAACTACTACGTGAAGGCATATCTAGGACAAACTCCACCCAAGACACCCAAGTACTGGCTTGCATTTACAGTTTCTGTACCACCACTTGGTTTTAGCACCTACACTGTCTCAACTGCCAAAAGGACAGGGTCCACAAGATCATCAGTAGATATATATAAAAGTAGTGAAAAGTCTAAATTTGAAGTTGGTCAAGGAAATTTGAAGCTTAGATTTTCTACGAATCAAGAGAGTACCAATTATGTTAATATAAGAAACCTGGTTGAGGAACAGGTTGAACTAAGTTACCTATACTATTCTGGATACAATGGAACTAATCAAAAAGATCCACAGAATTCTGGGGCCTATATCTTCCGTCCAATTCCAAATGGCACACATCCCATAAACCATGAAAAGAAGGTTCCATTGACTGTTTTGCATGGACCAGTACTAGATGAAGTGCATCAGCAAATCAATCCATGGATATATCAGATTACCAGACTACACAAAGGAAAGGAGCATGTTGAAGTGGAGTTTATTGTTGGCCCTATACCGGTTGAAGATGGAATTGGTAAAGAAGTTGCCACTCGGATTTCAACTACTATGGAAACCAACAAAACGTTTTACACGGATTCTAATGGGCGTGATTTTCTCAAACGGATACGTGACTACAGAACAGACTGGGACCTGGAAGTGAACCAACCTGCTGCTGGAAATTATTACCCTATTAATCTTGGGATATACATAGAGGATAATAAAACAGAATTCTCAGTTTTGGTGGATAGAGCTATTGGAGGATCCAGCTTACAAGATGGACAAATAGAGCTGATGGTCCACAGGAGATTACTACTTGATGATTCAAAAGGTGTTGCAGAGGCTCTAAATGAAACAGATTGTGTTGGTGATGATTGCAGGGGTCTAACTGTCCAAGGTAAATTTTACTACAGAATAGATCCCTTGGGCGAGGGTGCTAAGTGGCGTCGTACTTTTGGCCAGGAAATATATTCTCCACTTCTGTTAGCCTTTGCTGAAAAGGATGATAAAGATGACTGGATGAATTCCCGTGTATTAACATTTTCAGGAATTGATTCTTCTTACGCATTACCTGATAATATTGCTATTATAACATTACAGGAACTTGATGATGGGACAGTTCTCCTTCGGTTAGCACATCTATATGAGATTGAAGAAGATAAAGATCTCTCTGTAATGGCAAGTGTGGAGCTGAAAAAGCTCTTGCCTGGGAGGAAGATCAAAGAGGTGAAAGAGATGAACTTATCTGCCAATCAAGAAAGGAAAGAGATGGAGAGAAAAAGACTTGCTTGGAAAGTAGAAGGCTCTTCTGGAAATAGACATGTTTCAAGGGGAGGGCCAGTTGATCCAAAAGAGCTAAACGTGGAGCTTGCTCCAATGGAAATCCGCACTTTTATCATTTACTTTGATGATGTGTCTAACCAACTTTTTGATGCATTGTAG 2991 0.4059 MVYNTSQGIVPGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSMVHALLADKNRKFIYVEMAFFKRWWRDQSEAVQDVVKKLVSSGQLEFINGAMAMHDEAVTHYIDMIDQTALGHQFLKEEFGVTPRIGWQIDPFGHSAVQAYLLGAEVGFDSFFFGRIDYQDRAKRKKEKSLEVIWQGSKSLGSSAQIFAGAFPENYEPPSGFYFEVNDVSPIVQDDMELFDYNVQDRVNDFVAAALSQANITRTNHIMWTMGTDFKYQYAHTWFRQLDKLIHYVNMDGRVNALYSTPSIYTDAKYATNESWPIKTHDFFPYADRANAYWTGYFTSRPAIKRYVRLMSGYYLAARQLEFFRGRMNSGPNTDSLADALAIVQHHDAVTGTEKQHVANDYSKRLSIGYKKAEELVSSSLACLVESPLLTRCQNPVTKFQQCPLLNISYCPASEVDLVQGKNLVIVVYNSLGWRRNEVIRIPVNEANVRVHDSNGIEIESQLLPQAEKYVDLRNYYVKAYLGQTPPKTPKYWLAFTVSVPPLGFSTYTVSTAKRTGSTRSSVDIYKSSEKSKFEVGQGNLKLRFSTNQESTNYVNIRNLVEEQVELSYLYYSGYNGTNQKDPQNSGAYIFRPIPNGTHPINHEKKVPLTVLHGPVLDEVHQQINPWIYQITRLHKGKEHVEVEFIVGPIPVEDGIGKEVATRISTTMETNKTFYTDSNGRDFLKRIRDYRTDWDLEVNQPAAGNYYPINLGIYIEDNKTEFSVLVDRAIGGSSLQDGQIELMVHRRLLLDDSKGVAEALNETDCVGDDCRGLTVQGKFYYRIDPLGEGAKWRRTFGQEIYSPLLLAFAEKDDKDDWMNSRVLTFSGIDSSYALPDNIAIITLQELDDGTVLLRLAHLYEIEEDKDLSVMASVELKKLLPGRKIKEVKEMNLSANQERKEMERKRLAWKVEGSSGNRHVSRGGPVDPKELNVELAPMEIRTFIIYFDDVSNQLFDAL 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02119 996 Gene3D - 574 841 - -
Pumo5g02119 996 FunFam Alpha-mannosidase 862 987 - -
Pumo5g02119 996 FunFam Alpha-mannosidase 574 841 - -
Pumo5g02119 996 FunFam Alpha-mannosidase 14 294 - -
Pumo5g02119 996 Pfam Alpha mannosidase middle domain 331 423 IPR015341 GO:0004559|GO:0006013
Pumo5g02119 996 SUPERFAMILY Galactose mutarotase-like 428 985 IPR011013 GO:0003824|GO:0005975|GO:0030246
Pumo5g02119 996 FunFam Alpha-mannosidase 451 575 - -
Pumo5g02119 996 Gene3D - 862 988 - -
Pumo5g02119 996 FunFam Alpha-mannosidase 293 373 - -
Pumo5g02119 996 Coils Coil 923 943 - -
Pumo5g02119 996 CDD GH38N_AMII_LAM_like 14 290 - -
Pumo5g02119 996 PANTHER ALPHA-MANNOSIDASE 3 986 - -
Pumo5g02119 996 SUPERFAMILY Glycoside hydrolase/deacetylase 3 327 IPR011330 GO:0005975
Pumo5g02119 996 SUPERFAMILY Families 57/38 glycoside transferase middle domain 330 424 IPR028995 -
Pumo5g02119 996 Gene3D Glycoside hydrolase family 38, central domain 374 427 IPR037094 GO:0004559|GO:0006013
Pumo5g02119 996 SMART Alpha_mann_mid_2 331 405 IPR015341 GO:0004559|GO:0006013
Pumo5g02119 996 Gene3D Glycoside hydrolase family 38, central domain 295 373 IPR037094 GO:0004559|GO:0006013
Pumo5g02119 996 Gene3D - 451 573 IPR013780 -
Pumo5g02119 996 Gene3D Glycoside hydrolase 38, N terminal domain 14 294 IPR027291 -
Pumo5g02119 996 FunFam Alpha-mannosidase 374 428 - -
Pumo5g02119 996 Pfam Glycosyl hydrolases family 38 N-terminal domain 15 326 IPR000602 GO:0004559|GO:0006013
Pumo5g02119 996 Pfam Glycosyl hydrolases family 38 C-terminal domain 578 792 IPR011682 GO:0004559|GO:0006013
Pumo5g02119 996 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 876 982 IPR041147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02119 Pumo-Chr5 57729901 57744963 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02119 1 899 Glycoside Hydrolase AT5G13980 72.437 0.0 1380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02119 K01191 - gmx:100776282 1909.42