Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02091 ATGAAGAAGGCGTCGTCGCCTGTGACGATGGATCACGTGCTGCTGGCGTCGCAGGAGACGAAGGAGGCACGTGAGGTGCGGATTCGGAGCCTCTTCGATTTCTTCGACAGAGAGAATCTCGGGTTCTTGGACTACGCGCACATTGAAGCGGGTCTCTCGGCGCTTCAGATTCCGTCGGAGTACAAGTACGCGAAGGATTTGTTGAACGCTTGCGATGCCAACAAGGATGGGAGAGTGGATTACCAGGAATTCAGGAAGTACATGGATGATAAAGAATTGGAGCTTTATCGGATTTTTCAGGCCATTGATGTTGCGCACAATGGGTGCATTTTGCCTGAGGAGCTTTGGGAGGCACTTGTGAGAGCAGGGATTAAGATTGATGATGAGGAACTTGCCCGTTTTGTTGAGCGTGTTGATAAGGATAATAATGGTGTTATAACATTTGAAGAATGGAGGGATTTTCTGCTGCTTTACCCTCATGAAGCAACCATTGAGAACATTTACCATTATTTGGAGCGGATATGTATGGTTGATATTGGGGAACAGACTGTTATTCCAGCAGGCATTGGTAAGCACATTCATGCAAGCAGGTATCTGATTGCAGGAGGAGTAGCAGGTGTAGCATCACGAACAGCAACTGCACCCCTTGATCGTCTAAAGGTGGTATTGCAAGTCCAAACAACGCGAGCTCATATAATGCCTGCTATAAAAGATATATGGAAAGAAGGTGGTTTGTTAGGATTTTTTCGAGGCAATGGCTTAAATGTTCTTAAGGTGGCCCCTGAGAGTGCCATTAGATTTTATAGCTATGAGATGCTGAAGACCTTCATTGTGAGCTTCAAAGGGGAAGAGGCAAAGGCTGCTGATATTGGAGCTATGGGGCGGCTGCTAGCTGGTGGTATTGCTGGTGCTGTAGCTCAAACTGCAATATATCCCATGGATCTTGTTAAAACAAGACTACAAACCTATGCTTGTAAAAGTGGAAGAATTCCAAGTCTTGGAACCCTTTCAAAAGATATATGGGTTCAGGAAGGACCCCGGGCTTTTTATAGGGGATTGATTCCTTCTCTTCTTGGGATTATCCCTTATGCTGGCATAGATCTTGCTGCCTATGAAACCTTGAAGGATATGTCCAAGCAGTATATTCTTCATGATGGAGAACCTGGCCCTCTAGTACAATTAGGATGTGGAACTGTATCTGGAGCTCTTGGAGCAACATGTGTTTACCCACTGCAGGTGGTTAGAACAAGAATGCAGGCTCAACGCTCTTATAAGGGAATGGCTGATGTATTCAGGAAAACCCTGGAACATGAAGGCTTTAGGGGATTCTACAAAGGAATATTTCCTAACTTACTCAAAGTTGTACCGTCAGCAAGCATCACCTACATGGTTTATGAGAGTATGAAAAAAGGTTTGGATTTGGAGTGA 1428 0.451 MKKASSPVTMDHVLLASQETKEAREVRIRSLFDFFDRENLGFLDYAHIEAGLSALQIPSEYKYAKDLLNACDANKDGRVDYQEFRKYMDDKELELYRIFQAIDVAHNGCILPEELWEALVRAGIKIDDEELARFVERVDKDNNGVITFEEWRDFLLLYPHEATIENIYHYLERICMVDIGEQTVIPAGIGKHIHASRYLIAGGVAGVASRTATAPLDRLKVVLQVQTTRAHIMPAIKDIWKEGGLLGFFRGNGLNVLKVAPESAIRFYSYEMLKTFIVSFKGEEAKAADIGAMGRLLAGGIAGAVAQTAIYPMDLVKTRLQTYACKSGRIPSLGTLSKDIWVQEGPRAFYRGLIPSLLGIIPYAGIDLAAYETLKDMSKQYILHDGEPGPLVQLGCGTVSGALGATCVYPLQVVRTRMQAQRSYKGMADVFRKTLEHEGFRGFYKGIFPNLLKVVPSASITYMVYESMKKGLDLE 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02091 475 SUPERFAMILY Mitochondrial carrier 191 466 IPR023395 -
Pumo5g02091 475 ProSiteProfiles EF-hand calcium-binding domain profile. 23 58 IPR002048 GO:0005509
Pumo5g02091 475 FunFam Mitochondrial substrate carrier family protein 1 93 - -
Pumo5g02091 475 FunFam Mitochondrial substrate carrier family protein 189 473 - -
Pumo5g02091 475 ProSiteProfiles EF-hand calcium-binding domain profile. 95 125 IPR002048 GO:0005509
Pumo5g02091 475 ProSiteProfiles Solute carrier (Solcar) repeat profile. 193 276 IPR018108 -
Pumo5g02091 475 ProSitePatterns EF-hand calcium-binding domain. 72 84 IPR018247 -
Pumo5g02091 475 ProSitePatterns EF-hand calcium-binding domain. 139 151 IPR018247 -
Pumo5g02091 475 ProSiteProfiles EF-hand calcium-binding domain profile. 59 94 IPR002048 GO:0005509
Pumo5g02091 475 ProSiteProfiles EF-hand calcium-binding domain profile. 126 161 IPR002048 GO:0005509
Pumo5g02091 475 ProSiteProfiles Solute carrier (Solcar) repeat profile. 290 377 IPR018108 -
Pumo5g02091 475 FunFam Calcium-binding mitochondrial carrier protein SCaMC-1 106 181 - -
Pumo5g02091 475 SMART efh_1 94 122 IPR002048 GO:0005509
Pumo5g02091 475 SMART efh_1 130 158 IPR002048 GO:0005509
Pumo5g02091 475 SMART efh_1 27 55 IPR002048 GO:0005509
Pumo5g02091 475 SMART efh_1 63 91 IPR002048 GO:0005509
Pumo5g02091 475 SUPERFAMILY EF-hand 22 189 IPR011992 -
Pumo5g02091 475 Gene3D Mitochondrial carrier domain 189 472 IPR023395 -
Pumo5g02091 475 Pfam EF hand 65 86 IPR002048 GO:0005509
Pumo5g02091 475 ProSiteProfiles Solute carrier (Solcar) repeat profile. 388 471 IPR018108 -
Pumo5g02091 475 Gene3D - 106 181 - -
Pumo5g02091 475 Gene3D - 26 103 - -
Pumo5g02091 475 Pfam Mitochondrial carrier protein 192 278 IPR018108 -
Pumo5g02091 475 Pfam Mitochondrial carrier protein 389 472 IPR018108 -
Pumo5g02091 475 Pfam Mitochondrial carrier protein 290 378 IPR018108 -
Pumo5g02091 475 PANTHER SOLUTE CARRIER FAMILY 25 151 472 - -
Pumo5g02091 475 Pfam EF-hand domain pair 94 153 IPR002048 GO:0005509
Pumo5g02091 475 PRINTS Mitochondrial carrier protein signature 198 211 IPR002067 GO:0055085
Pumo5g02091 475 PRINTS Mitochondrial carrier protein signature 305 323 IPR002067 GO:0055085
Pumo5g02091 475 PRINTS Mitochondrial carrier protein signature 251 271 IPR002067 GO:0055085
Pumo5g02091 475 PRINTS Mitochondrial carrier protein signature 397 419 IPR002067 GO:0055085
Pumo5g02091 475 PRINTS Mitochondrial carrier protein signature 211 225 IPR002067 GO:0055085
Pumo5g02091 475 PRINTS Mitochondrial carrier protein signature 350 368 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02091 Pumo-Chr5 57380741 57384539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02091 3 475 EF-hand Containing Proteins AT5G51050 73.207 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02091 K14684 - gmx:100775805 911.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02091 5 57380741 57384539 Pumo5g02091 5 57380741 57384539 ECH