Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02088 ATGTCGTCTGTGCCAGCACGAACAGGGCGACAAAGACAGCGTTATGAGGACAATTTGCGCCTTGTCTCTGGATGTATTCCCTATAGATGGAGAAAGGACAACACAGATCAAATGGGGGAAACTGAGGAGATAATAGAAGTACTCATGGTTTCTTCACCAAAACGTGATGACCTTGTATTCCCAAAGGGTGGATGGGAGGATGATGAGACTGTTACAGAAGCTGCTTGTCGTGAAGCTTTAGAGGAAGCAGGAGTTAAAGGAATACTAAGAGAAATTCCATTAGGAATATGGGAGTTCAGAAGCAAAAGCAGTCAAGACTTATGTAGCATGGAAGGAGGCTGCAGAGGATACATGTTCGCATTGGAGGTGACTGAAGAACTTGAGACATGGCCAGAGCAGAAAAACCGCGCTCGCCAATGGTTAAACATAAAAGAGGCATTCAGACTCAGCCGATATGACTGGATGTGTAATGCACTTGAGGTGTTTTTGAGAGTAATGGCAGAGGACAGAAACCTTGAGAAGCAAGACCAGAATGTTGAACTTGAACCCCCTTCAATTGTAGTAGAAGATGTGTCAGAATGCCAAAGTATGTCACCCACCTGCTATAAAAGATCCTCTACTATGCAGCACCATGGAATGCCTCCAAATTCCAATCTTCTGTCACGTGCTACTCAAGAGATAACCATCCACTTTGGTTATTGA 702 0.443 MSSVPARTGRQRQRYEDNLRLVSGCIPYRWRKDNTDQMGETEEIIEVLMVSSPKRDDLVFPKGGWEDDETVTEAACREALEEAGVKGILREIPLGIWEFRSKSSQDLCSMEGGCRGYMFALEVTEELETWPEQKNRARQWLNIKEAFRLSRYDWMCNALEVFLRVMAEDRNLEKQDQNVELEPPSIVVEDVSECQSMSPTCYKRSSTMQHHGMPPNSNLLSRATQEITIHFGY 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02088 233 FunFam Nudix hydrolase 13 mitochondrial 4 165 - -
Pumo5g02088 233 Pfam NUDIX domain 47 152 IPR000086 -
Pumo5g02088 233 ProSiteProfiles Nudix hydrolase domain profile. 18 163 IPR000086 -
Pumo5g02088 233 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 164 - -
Pumo5g02088 233 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 6 168 - -
Pumo5g02088 233 ProSitePatterns Nudix box signature. 63 84 IPR020084 GO:0016787
Pumo5g02088 233 CDD Nudix_Hydrolase_9 21 155 IPR047198 GO:0016462
Pumo5g02088 233 SUPERFAMILY Nudix 14 174 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02088 Pumo-Chr5 57294935 57299997 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02088 K07766 - gmx:100794003 444.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02088 5 57294935 57299997 Pumo5g02088 5 57294935 57299997 ECH